2 * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8)
3 * Copyright (C) 2012 J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle
5 * This file is part of Jalview.
7 * Jalview is free software: you can redistribute it and/or
8 * modify it under the terms of the GNU General Public License
9 * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
11 * Jalview is distributed in the hope that it will be useful, but
12 * WITHOUT ANY WARRANTY; without even the implied warranty
13 * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
14 * PURPOSE. See the GNU General Public License for more details.
16 * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
18 package jalview.schemabinding.version2.descriptors;
20 //---------------------------------/
21 //- Imported classes and packages -/
22 //---------------------------------/
24 import jalview.schemabinding.version2.AlcodMap;
27 * Class AlcodMapDescriptor.
29 * @version $Revision$ $Date$
31 public class AlcodMapDescriptor extends
32 org.exolab.castor.xml.util.XMLClassDescriptorImpl
35 // --------------------------/
36 // - Class/Member Variables -/
37 // --------------------------/
40 * Field _elementDefinition.
42 private boolean _elementDefinition;
47 private java.lang.String _nsPrefix;
52 private java.lang.String _nsURI;
57 private java.lang.String _xmlName;
63 public AlcodMapDescriptor()
66 _nsURI = "www.vamsas.ac.uk/jalview/version2";
67 _xmlName = "alcodMap";
68 _elementDefinition = true;
70 // -- set grouping compositor
71 setCompositorAsSequence();
72 org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null;
73 org.exolab.castor.mapping.FieldHandler handler = null;
74 org.exolab.castor.xml.FieldValidator fieldValidator = null;
75 // -- initialize attribute descriptors
78 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
79 java.lang.String.class, "_dnasq", "dnasq",
80 org.exolab.castor.xml.NodeType.Attribute);
81 desc.setImmutable(true);
82 handler = new org.exolab.castor.xml.XMLFieldHandler()
84 public java.lang.Object getValue(java.lang.Object object)
85 throws IllegalStateException
87 AlcodMap target = (AlcodMap) object;
88 return target.getDnasq();
91 public void setValue(java.lang.Object object, java.lang.Object value)
92 throws IllegalStateException, IllegalArgumentException
96 AlcodMap target = (AlcodMap) object;
97 target.setDnasq((java.lang.String) value);
98 } catch (java.lang.Exception ex)
100 throw new IllegalStateException(ex.toString());
104 public java.lang.Object newInstance(java.lang.Object parent)
109 desc.setHandler(handler);
110 desc.setRequired(true);
111 desc.setMultivalued(false);
112 addFieldDescriptor(desc);
114 // -- validation code for: _dnasq
115 fieldValidator = new org.exolab.castor.xml.FieldValidator();
116 fieldValidator.setMinOccurs(1);
118 org.exolab.castor.xml.validators.StringValidator typeValidator;
119 typeValidator = new org.exolab.castor.xml.validators.StringValidator();
120 fieldValidator.setValidator(typeValidator);
121 typeValidator.setWhiteSpace("preserve");
123 desc.setValidator(fieldValidator);
124 // -- initialize element descriptors
127 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
128 jalview.schemabinding.version2.Mapping.class, "_mapping",
129 "Mapping", org.exolab.castor.xml.NodeType.Element);
130 handler = new org.exolab.castor.xml.XMLFieldHandler()
132 public java.lang.Object getValue(java.lang.Object object)
133 throws IllegalStateException
135 AlcodMap target = (AlcodMap) object;
136 return target.getMapping();
139 public void setValue(java.lang.Object object, java.lang.Object value)
140 throws IllegalStateException, IllegalArgumentException
144 AlcodMap target = (AlcodMap) object;
145 target.setMapping((jalview.schemabinding.version2.Mapping) value);
146 } catch (java.lang.Exception ex)
148 throw new IllegalStateException(ex.toString());
152 public java.lang.Object newInstance(java.lang.Object parent)
154 return new jalview.schemabinding.version2.Mapping();
157 desc.setHandler(handler);
158 desc.setNameSpaceURI("www.vamsas.ac.uk/jalview/version2");
159 desc.setRequired(true);
160 desc.setMultivalued(false);
161 addFieldDescriptor(desc);
163 // -- validation code for: _mapping
164 fieldValidator = new org.exolab.castor.xml.FieldValidator();
165 fieldValidator.setMinOccurs(1);
168 desc.setValidator(fieldValidator);
176 * Method getAccessMode.
178 * @return the access mode specified for this class.
180 public org.exolab.castor.mapping.AccessMode getAccessMode()
186 * Method getIdentity.
188 * @return the identity field, null if this class has no identity.
190 public org.exolab.castor.mapping.FieldDescriptor getIdentity()
192 return super.getIdentity();
196 * Method getJavaClass.
198 * @return the Java class represented by this descriptor.
200 public java.lang.Class getJavaClass()
202 return jalview.schemabinding.version2.AlcodMap.class;
206 * Method getNameSpacePrefix.
208 * @return the namespace prefix to use when marshaling as XML.
210 public java.lang.String getNameSpacePrefix()
216 * Method getNameSpaceURI.
218 * @return the namespace URI used when marshaling and unmarshaling as XML.
220 public java.lang.String getNameSpaceURI()
226 * Method getValidator.
228 * @return a specific validator for the class described by this
231 public org.exolab.castor.xml.TypeValidator getValidator()
239 * @return the XML Name for the Class being described.
241 public java.lang.String getXMLName()
247 * Method isElementDefinition.
249 * @return true if XML schema definition of this Class is that of a global
250 * element or element with anonymous type definition.
252 public boolean isElementDefinition()
254 return _elementDefinition;