2 * Jalview - A Sequence Alignment Editor and Viewer (Version 2.4.1)
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3 * Copyright (C) 2009 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
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5 * This program is free software; you can redistribute it and/or
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6 * modify it under the terms of the GNU General Public License
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7 * as published by the Free Software Foundation; either version 2
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8 * of the License, or (at your option) any later version.
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10 * This program is distributed in the hope that it will be useful,
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11 * but WITHOUT ANY WARRANTY; without even the implied warranty of
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12 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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13 * GNU General Public License for more details.
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15 * You should have received a copy of the GNU General Public License
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16 * along with this program; if not, write to the Free Software
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17 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
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19 package jalview.schemabinding.version2.descriptors;
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21 //---------------------------------/
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22 //- Imported classes and packages -/
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23 //---------------------------------/
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25 import jalview.schemabinding.version2.AlcodMap;
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28 * Class AlcodMapDescriptor.
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30 * @version $Revision$ $Date$
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32 public class AlcodMapDescriptor extends org.exolab.castor.xml.util.XMLClassDescriptorImpl {
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35 //--------------------------/
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36 //- Class/Member Variables -/
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37 //--------------------------/
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40 * Field _elementDefinition.
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42 private boolean _elementDefinition;
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47 private java.lang.String _nsPrefix;
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52 private java.lang.String _nsURI;
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57 private java.lang.String _xmlName;
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64 public AlcodMapDescriptor() {
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66 _nsURI = "www.vamsas.ac.uk/jalview/version2";
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67 _xmlName = "alcodMap";
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68 _elementDefinition = true;
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70 //-- set grouping compositor
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71 setCompositorAsSequence();
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72 org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null;
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73 org.exolab.castor.mapping.FieldHandler handler = null;
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74 org.exolab.castor.xml.FieldValidator fieldValidator = null;
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75 //-- initialize attribute descriptors
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78 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_dnasq", "dnasq", org.exolab.castor.xml.NodeType.Attribute);
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79 desc.setImmutable(true);
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80 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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81 public java.lang.Object getValue( java.lang.Object object )
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82 throws IllegalStateException
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84 AlcodMap target = (AlcodMap) object;
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85 return target.getDnasq();
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87 public void setValue( java.lang.Object object, java.lang.Object value)
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88 throws IllegalStateException, IllegalArgumentException
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91 AlcodMap target = (AlcodMap) object;
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92 target.setDnasq( (java.lang.String) value);
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93 } catch (java.lang.Exception ex) {
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94 throw new IllegalStateException(ex.toString());
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97 public java.lang.Object newInstance(java.lang.Object parent) {
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101 desc.setHandler(handler);
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102 desc.setRequired(true);
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103 desc.setMultivalued(false);
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104 addFieldDescriptor(desc);
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106 //-- validation code for: _dnasq
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107 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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108 fieldValidator.setMinOccurs(1);
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110 org.exolab.castor.xml.validators.StringValidator typeValidator;
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111 typeValidator = new org.exolab.castor.xml.validators.StringValidator();
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112 fieldValidator.setValidator(typeValidator);
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113 typeValidator.setWhiteSpace("preserve");
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115 desc.setValidator(fieldValidator);
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116 //-- initialize element descriptors
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119 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.Mapping.class, "_mapping", "Mapping", org.exolab.castor.xml.NodeType.Element);
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120 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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121 public java.lang.Object getValue( java.lang.Object object )
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122 throws IllegalStateException
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124 AlcodMap target = (AlcodMap) object;
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125 return target.getMapping();
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127 public void setValue( java.lang.Object object, java.lang.Object value)
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128 throws IllegalStateException, IllegalArgumentException
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131 AlcodMap target = (AlcodMap) object;
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132 target.setMapping( (jalview.schemabinding.version2.Mapping) value);
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133 } catch (java.lang.Exception ex) {
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134 throw new IllegalStateException(ex.toString());
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137 public java.lang.Object newInstance(java.lang.Object parent) {
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138 return new jalview.schemabinding.version2.Mapping();
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141 desc.setHandler(handler);
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142 desc.setNameSpaceURI("www.vamsas.ac.uk/jalview/version2");
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143 desc.setRequired(true);
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144 desc.setMultivalued(false);
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145 addFieldDescriptor(desc);
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147 //-- validation code for: _mapping
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148 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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149 fieldValidator.setMinOccurs(1);
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152 desc.setValidator(fieldValidator);
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161 * Method getAccessMode.
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163 * @return the access mode specified for this class.
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165 public org.exolab.castor.mapping.AccessMode getAccessMode(
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171 * Method getIdentity.
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173 * @return the identity field, null if this class has no
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176 public org.exolab.castor.mapping.FieldDescriptor getIdentity(
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178 return super.getIdentity();
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182 * Method getJavaClass.
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184 * @return the Java class represented by this descriptor.
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186 public java.lang.Class getJavaClass(
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188 return jalview.schemabinding.version2.AlcodMap.class;
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192 * Method getNameSpacePrefix.
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194 * @return the namespace prefix to use when marshaling as XML.
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196 public java.lang.String getNameSpacePrefix(
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202 * Method getNameSpaceURI.
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204 * @return the namespace URI used when marshaling and
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205 * unmarshaling as XML.
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207 public java.lang.String getNameSpaceURI(
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213 * Method getValidator.
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215 * @return a specific validator for the class described by this
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218 public org.exolab.castor.xml.TypeValidator getValidator(
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224 * Method getXMLName.
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226 * @return the XML Name for the Class being described.
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228 public java.lang.String getXMLName(
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234 * Method isElementDefinition.
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236 * @return true if XML schema definition of this Class is that
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238 * element or element with anonymous type definition.
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240 public boolean isElementDefinition(
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242 return _elementDefinition;
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