2 * Jalview - A Sequence Alignment Editor and Viewer (Version 2.6)
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3 * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
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5 * This file is part of Jalview.
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7 * Jalview is free software: you can redistribute it and/or
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8 * modify it under the terms of the GNU General Public License
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9 * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
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11 * Jalview is distributed in the hope that it will be useful, but
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12 * WITHOUT ANY WARRANTY; without even the implied warranty
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13 * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
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14 * PURPOSE. See the GNU General Public License for more details.
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16 * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
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18 package jalview.schemabinding.version2.descriptors;
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20 //---------------------------------/
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21 //- Imported classes and packages -/
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22 //---------------------------------/
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24 import jalview.schemabinding.version2.Alcodon;
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27 * Class AlcodonDescriptor.
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29 * @version $Revision$ $Date$
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31 public class AlcodonDescriptor extends
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32 org.exolab.castor.xml.util.XMLClassDescriptorImpl
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35 // --------------------------/
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36 // - Class/Member Variables -/
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37 // --------------------------/
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40 * Field _elementDefinition.
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42 private boolean _elementDefinition;
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47 private java.lang.String _nsPrefix;
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52 private java.lang.String _nsURI;
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57 private java.lang.String _xmlName;
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59 // ----------------/
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60 // - Constructors -/
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61 // ----------------/
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63 public AlcodonDescriptor()
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66 _nsURI = "www.vamsas.ac.uk/jalview/version2";
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67 _xmlName = "alcodon";
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68 _elementDefinition = true;
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69 org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null;
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70 org.exolab.castor.mapping.FieldHandler handler = null;
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71 org.exolab.castor.xml.FieldValidator fieldValidator = null;
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72 // -- initialize attribute descriptors
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75 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
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76 java.lang.Long.TYPE, "_pos1", "pos1",
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77 org.exolab.castor.xml.NodeType.Attribute);
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78 handler = new org.exolab.castor.xml.XMLFieldHandler()
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80 public java.lang.Object getValue(java.lang.Object object)
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81 throws IllegalStateException
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83 Alcodon target = (Alcodon) object;
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84 if (!target.hasPos1())
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88 return new java.lang.Long(target.getPos1());
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91 public void setValue(java.lang.Object object, java.lang.Object value)
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92 throws IllegalStateException, IllegalArgumentException
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96 Alcodon target = (Alcodon) object;
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97 // if null, use delete method for optional primitives
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100 target.deletePos1();
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103 target.setPos1(((java.lang.Long) value).longValue());
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104 } catch (java.lang.Exception ex)
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106 throw new IllegalStateException(ex.toString());
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110 public java.lang.Object newInstance(java.lang.Object parent)
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115 desc.setHandler(handler);
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116 desc.setMultivalued(false);
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117 addFieldDescriptor(desc);
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119 // -- validation code for: _pos1
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120 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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121 { // -- local scope
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122 org.exolab.castor.xml.validators.LongValidator typeValidator;
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123 typeValidator = new org.exolab.castor.xml.validators.LongValidator();
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124 fieldValidator.setValidator(typeValidator);
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126 desc.setValidator(fieldValidator);
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128 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
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129 java.lang.Long.TYPE, "_pos2", "pos2",
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130 org.exolab.castor.xml.NodeType.Attribute);
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131 handler = new org.exolab.castor.xml.XMLFieldHandler()
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133 public java.lang.Object getValue(java.lang.Object object)
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134 throws IllegalStateException
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136 Alcodon target = (Alcodon) object;
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137 if (!target.hasPos2())
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141 return new java.lang.Long(target.getPos2());
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144 public void setValue(java.lang.Object object, java.lang.Object value)
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145 throws IllegalStateException, IllegalArgumentException
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149 Alcodon target = (Alcodon) object;
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150 // if null, use delete method for optional primitives
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153 target.deletePos2();
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156 target.setPos2(((java.lang.Long) value).longValue());
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157 } catch (java.lang.Exception ex)
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159 throw new IllegalStateException(ex.toString());
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163 public java.lang.Object newInstance(java.lang.Object parent)
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168 desc.setHandler(handler);
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169 desc.setMultivalued(false);
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170 addFieldDescriptor(desc);
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172 // -- validation code for: _pos2
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173 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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174 { // -- local scope
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175 org.exolab.castor.xml.validators.LongValidator typeValidator;
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176 typeValidator = new org.exolab.castor.xml.validators.LongValidator();
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177 fieldValidator.setValidator(typeValidator);
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179 desc.setValidator(fieldValidator);
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181 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
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182 java.lang.Long.TYPE, "_pos3", "pos3",
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183 org.exolab.castor.xml.NodeType.Attribute);
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184 handler = new org.exolab.castor.xml.XMLFieldHandler()
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186 public java.lang.Object getValue(java.lang.Object object)
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187 throws IllegalStateException
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189 Alcodon target = (Alcodon) object;
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190 if (!target.hasPos3())
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194 return new java.lang.Long(target.getPos3());
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197 public void setValue(java.lang.Object object, java.lang.Object value)
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198 throws IllegalStateException, IllegalArgumentException
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202 Alcodon target = (Alcodon) object;
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203 // if null, use delete method for optional primitives
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206 target.deletePos3();
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209 target.setPos3(((java.lang.Long) value).longValue());
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210 } catch (java.lang.Exception ex)
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212 throw new IllegalStateException(ex.toString());
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216 public java.lang.Object newInstance(java.lang.Object parent)
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221 desc.setHandler(handler);
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222 desc.setMultivalued(false);
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223 addFieldDescriptor(desc);
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225 // -- validation code for: _pos3
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226 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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227 { // -- local scope
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228 org.exolab.castor.xml.validators.LongValidator typeValidator;
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229 typeValidator = new org.exolab.castor.xml.validators.LongValidator();
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230 fieldValidator.setValidator(typeValidator);
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232 desc.setValidator(fieldValidator);
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233 // -- initialize element descriptors
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242 * Method getAccessMode.
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244 * @return the access mode specified for this class.
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246 public org.exolab.castor.mapping.AccessMode getAccessMode()
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252 * Method getIdentity.
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254 * @return the identity field, null if this class has no identity.
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256 public org.exolab.castor.mapping.FieldDescriptor getIdentity()
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258 return super.getIdentity();
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262 * Method getJavaClass.
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264 * @return the Java class represented by this descriptor.
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266 public java.lang.Class getJavaClass()
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268 return jalview.schemabinding.version2.Alcodon.class;
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272 * Method getNameSpacePrefix.
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274 * @return the namespace prefix to use when marshaling as XML.
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276 public java.lang.String getNameSpacePrefix()
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282 * Method getNameSpaceURI.
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284 * @return the namespace URI used when marshaling and unmarshaling as XML.
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286 public java.lang.String getNameSpaceURI()
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292 * Method getValidator.
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294 * @return a specific validator for the class described by this
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297 public org.exolab.castor.xml.TypeValidator getValidator()
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303 * Method getXMLName.
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305 * @return the XML Name for the Class being described.
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307 public java.lang.String getXMLName()
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313 * Method isElementDefinition.
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315 * @return true if XML schema definition of this Class is that of a global
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316 * element or element with anonymous type definition.
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318 public boolean isElementDefinition()
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320 return _elementDefinition;
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