2 * Jalview - A Sequence Alignment Editor and Viewer (Development Version 2.4.1)
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3 * Copyright (C) 2009 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
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5 * This program is free software; you can redistribute it and/or
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6 * modify it under the terms of the GNU General Public License
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7 * as published by the Free Software Foundation; either version 2
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8 * of the License, or (at your option) any later version.
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10 * This program is distributed in the hope that it will be useful,
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11 * but WITHOUT ANY WARRANTY; without even the implied warranty of
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12 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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13 * GNU General Public License for more details.
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15 * You should have received a copy of the GNU General Public License
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16 * along with this program; if not, write to the Free Software
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17 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
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19 package jalview.schemabinding.version2.descriptors;
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21 //---------------------------------/
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22 //- Imported classes and packages -/
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23 //---------------------------------/
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25 import jalview.schemabinding.version2.AnnotationColours;
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28 * Class AnnotationColoursDescriptor.
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30 * @version $Revision$ $Date$
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32 public class AnnotationColoursDescriptor extends org.exolab.castor.xml.util.XMLClassDescriptorImpl {
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35 //--------------------------/
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36 //- Class/Member Variables -/
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37 //--------------------------/
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40 * Field _elementDefinition.
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42 private boolean _elementDefinition;
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47 private java.lang.String _nsPrefix;
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52 private java.lang.String _nsURI;
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57 private java.lang.String _xmlName;
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64 public AnnotationColoursDescriptor() {
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66 _nsURI = "www.jalview.org";
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67 _xmlName = "AnnotationColours";
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68 _elementDefinition = true;
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69 org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null;
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70 org.exolab.castor.mapping.FieldHandler handler = null;
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71 org.exolab.castor.xml.FieldValidator fieldValidator = null;
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72 //-- initialize attribute descriptors
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74 //-- _aboveThreshold
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75 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_aboveThreshold", "aboveThreshold", org.exolab.castor.xml.NodeType.Attribute);
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76 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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77 public java.lang.Object getValue( java.lang.Object object )
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78 throws IllegalStateException
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80 AnnotationColours target = (AnnotationColours) object;
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81 if (!target.hasAboveThreshold()) { return null; }
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82 return new java.lang.Integer(target.getAboveThreshold());
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84 public void setValue( java.lang.Object object, java.lang.Object value)
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85 throws IllegalStateException, IllegalArgumentException
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88 AnnotationColours target = (AnnotationColours) object;
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89 // if null, use delete method for optional primitives
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90 if (value == null) {
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91 target.deleteAboveThreshold();
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94 target.setAboveThreshold( ((java.lang.Integer) value).intValue());
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95 } catch (java.lang.Exception ex) {
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96 throw new IllegalStateException(ex.toString());
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99 public java.lang.Object newInstance(java.lang.Object parent) {
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103 desc.setHandler(handler);
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104 desc.setMultivalued(false);
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105 addFieldDescriptor(desc);
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107 //-- validation code for: _aboveThreshold
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108 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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110 org.exolab.castor.xml.validators.IntValidator typeValidator;
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111 typeValidator = new org.exolab.castor.xml.validators.IntValidator();
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112 fieldValidator.setValidator(typeValidator);
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113 typeValidator.setMinInclusive(-2147483648);
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114 typeValidator.setMaxInclusive(2147483647);
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116 desc.setValidator(fieldValidator);
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118 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_annotation", "annotation", org.exolab.castor.xml.NodeType.Attribute);
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119 desc.setImmutable(true);
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120 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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121 public java.lang.Object getValue( java.lang.Object object )
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122 throws IllegalStateException
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124 AnnotationColours target = (AnnotationColours) object;
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125 return target.getAnnotation();
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127 public void setValue( java.lang.Object object, java.lang.Object value)
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128 throws IllegalStateException, IllegalArgumentException
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131 AnnotationColours target = (AnnotationColours) object;
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132 target.setAnnotation( (java.lang.String) value);
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133 } catch (java.lang.Exception ex) {
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134 throw new IllegalStateException(ex.toString());
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137 public java.lang.Object newInstance(java.lang.Object parent) {
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141 desc.setHandler(handler);
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142 desc.setMultivalued(false);
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143 addFieldDescriptor(desc);
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145 //-- validation code for: _annotation
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146 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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148 org.exolab.castor.xml.validators.StringValidator typeValidator;
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149 typeValidator = new org.exolab.castor.xml.validators.StringValidator();
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150 fieldValidator.setValidator(typeValidator);
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151 typeValidator.setWhiteSpace("preserve");
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153 desc.setValidator(fieldValidator);
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155 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_minColour", "minColour", org.exolab.castor.xml.NodeType.Attribute);
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156 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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157 public java.lang.Object getValue( java.lang.Object object )
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158 throws IllegalStateException
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160 AnnotationColours target = (AnnotationColours) object;
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161 if (!target.hasMinColour()) { return null; }
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162 return new java.lang.Integer(target.getMinColour());
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164 public void setValue( java.lang.Object object, java.lang.Object value)
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165 throws IllegalStateException, IllegalArgumentException
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168 AnnotationColours target = (AnnotationColours) object;
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169 // if null, use delete method for optional primitives
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170 if (value == null) {
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171 target.deleteMinColour();
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174 target.setMinColour( ((java.lang.Integer) value).intValue());
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175 } catch (java.lang.Exception ex) {
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176 throw new IllegalStateException(ex.toString());
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179 public java.lang.Object newInstance(java.lang.Object parent) {
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183 desc.setHandler(handler);
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184 desc.setMultivalued(false);
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185 addFieldDescriptor(desc);
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187 //-- validation code for: _minColour
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188 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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190 org.exolab.castor.xml.validators.IntValidator typeValidator;
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191 typeValidator = new org.exolab.castor.xml.validators.IntValidator();
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192 fieldValidator.setValidator(typeValidator);
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193 typeValidator.setMinInclusive(-2147483648);
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194 typeValidator.setMaxInclusive(2147483647);
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196 desc.setValidator(fieldValidator);
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198 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_maxColour", "maxColour", org.exolab.castor.xml.NodeType.Attribute);
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199 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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200 public java.lang.Object getValue( java.lang.Object object )
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201 throws IllegalStateException
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203 AnnotationColours target = (AnnotationColours) object;
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204 if (!target.hasMaxColour()) { return null; }
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205 return new java.lang.Integer(target.getMaxColour());
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207 public void setValue( java.lang.Object object, java.lang.Object value)
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208 throws IllegalStateException, IllegalArgumentException
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211 AnnotationColours target = (AnnotationColours) object;
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212 // if null, use delete method for optional primitives
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213 if (value == null) {
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214 target.deleteMaxColour();
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217 target.setMaxColour( ((java.lang.Integer) value).intValue());
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218 } catch (java.lang.Exception ex) {
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219 throw new IllegalStateException(ex.toString());
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222 public java.lang.Object newInstance(java.lang.Object parent) {
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226 desc.setHandler(handler);
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227 desc.setMultivalued(false);
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228 addFieldDescriptor(desc);
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230 //-- validation code for: _maxColour
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231 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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233 org.exolab.castor.xml.validators.IntValidator typeValidator;
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234 typeValidator = new org.exolab.castor.xml.validators.IntValidator();
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235 fieldValidator.setValidator(typeValidator);
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236 typeValidator.setMinInclusive(-2147483648);
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237 typeValidator.setMaxInclusive(2147483647);
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239 desc.setValidator(fieldValidator);
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241 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_colourScheme", "colourScheme", org.exolab.castor.xml.NodeType.Attribute);
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242 desc.setImmutable(true);
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243 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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244 public java.lang.Object getValue( java.lang.Object object )
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245 throws IllegalStateException
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247 AnnotationColours target = (AnnotationColours) object;
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248 return target.getColourScheme();
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250 public void setValue( java.lang.Object object, java.lang.Object value)
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251 throws IllegalStateException, IllegalArgumentException
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254 AnnotationColours target = (AnnotationColours) object;
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255 target.setColourScheme( (java.lang.String) value);
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256 } catch (java.lang.Exception ex) {
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257 throw new IllegalStateException(ex.toString());
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260 public java.lang.Object newInstance(java.lang.Object parent) {
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264 desc.setHandler(handler);
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265 desc.setMultivalued(false);
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266 addFieldDescriptor(desc);
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268 //-- validation code for: _colourScheme
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269 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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271 org.exolab.castor.xml.validators.StringValidator typeValidator;
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272 typeValidator = new org.exolab.castor.xml.validators.StringValidator();
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273 fieldValidator.setValidator(typeValidator);
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274 typeValidator.setWhiteSpace("preserve");
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276 desc.setValidator(fieldValidator);
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278 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Float.TYPE, "_threshold", "threshold", org.exolab.castor.xml.NodeType.Attribute);
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279 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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280 public java.lang.Object getValue( java.lang.Object object )
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281 throws IllegalStateException
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283 AnnotationColours target = (AnnotationColours) object;
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284 if (!target.hasThreshold()) { return null; }
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285 return new java.lang.Float(target.getThreshold());
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287 public void setValue( java.lang.Object object, java.lang.Object value)
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288 throws IllegalStateException, IllegalArgumentException
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291 AnnotationColours target = (AnnotationColours) object;
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292 // if null, use delete method for optional primitives
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293 if (value == null) {
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294 target.deleteThreshold();
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297 target.setThreshold( ((java.lang.Float) value).floatValue());
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298 } catch (java.lang.Exception ex) {
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299 throw new IllegalStateException(ex.toString());
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302 public java.lang.Object newInstance(java.lang.Object parent) {
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306 desc.setHandler(handler);
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307 desc.setMultivalued(false);
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308 addFieldDescriptor(desc);
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310 //-- validation code for: _threshold
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311 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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313 org.exolab.castor.xml.validators.FloatValidator typeValidator;
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314 typeValidator = new org.exolab.castor.xml.validators.FloatValidator();
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315 fieldValidator.setValidator(typeValidator);
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316 typeValidator.setMinInclusive((float) -3.4028235E38);
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317 typeValidator.setMaxInclusive((float) 3.4028235E38);
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319 desc.setValidator(fieldValidator);
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320 //-- initialize element descriptors
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330 * Method getAccessMode.
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332 * @return the access mode specified for this class.
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334 public org.exolab.castor.mapping.AccessMode getAccessMode(
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340 * Method getIdentity.
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342 * @return the identity field, null if this class has no
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345 public org.exolab.castor.mapping.FieldDescriptor getIdentity(
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347 return super.getIdentity();
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351 * Method getJavaClass.
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353 * @return the Java class represented by this descriptor.
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355 public java.lang.Class getJavaClass(
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357 return jalview.schemabinding.version2.AnnotationColours.class;
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361 * Method getNameSpacePrefix.
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363 * @return the namespace prefix to use when marshaling as XML.
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365 public java.lang.String getNameSpacePrefix(
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371 * Method getNameSpaceURI.
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373 * @return the namespace URI used when marshaling and
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374 * unmarshaling as XML.
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376 public java.lang.String getNameSpaceURI(
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382 * Method getValidator.
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384 * @return a specific validator for the class described by this
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387 public org.exolab.castor.xml.TypeValidator getValidator(
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393 * Method getXMLName.
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395 * @return the XML Name for the Class being described.
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397 public java.lang.String getXMLName(
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403 * Method isElementDefinition.
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405 * @return true if XML schema definition of this Class is that
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407 * element or element with anonymous type definition.
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409 public boolean isElementDefinition(
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411 return _elementDefinition;
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