2 * This class was automatically generated with
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3 * <a href="http://www.castor.org">Castor 1.1</a>, using an XML
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8 package jalview.schemabinding.version2.descriptors;
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10 //---------------------------------/
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11 //- Imported classes and packages -/
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12 //---------------------------------/
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14 import jalview.schemabinding.version2.SequenceSet;
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17 * Class SequenceSetDescriptor.
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19 * @version $Revision$ $Date$
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21 public class SequenceSetDescriptor extends org.exolab.castor.xml.util.XMLClassDescriptorImpl {
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24 //--------------------------/
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25 //- Class/Member Variables -/
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26 //--------------------------/
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29 * Field _elementDefinition.
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31 private boolean _elementDefinition;
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36 private java.lang.String _nsPrefix;
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41 private java.lang.String _nsURI;
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46 private java.lang.String _xmlName;
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51 private org.exolab.castor.xml.XMLFieldDescriptor _identity;
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58 public SequenceSetDescriptor() {
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60 _nsURI = "www.vamsas.ac.uk/jalview/version2";
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61 _xmlName = "SequenceSet";
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62 _elementDefinition = true;
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64 //-- set grouping compositor
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65 setCompositorAsSequence();
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66 org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null;
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67 org.exolab.castor.mapping.FieldHandler handler = null;
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68 org.exolab.castor.xml.FieldValidator fieldValidator = null;
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69 //-- initialize attribute descriptors
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72 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_gapChar", "gapChar", org.exolab.castor.xml.NodeType.Attribute);
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73 desc.setImmutable(true);
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74 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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75 public java.lang.Object getValue( java.lang.Object object )
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76 throws IllegalStateException
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78 SequenceSet target = (SequenceSet) object;
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79 return target.getGapChar();
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81 public void setValue( java.lang.Object object, java.lang.Object value)
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82 throws IllegalStateException, IllegalArgumentException
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85 SequenceSet target = (SequenceSet) object;
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86 target.setGapChar( (java.lang.String) value);
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87 } catch (java.lang.Exception ex) {
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88 throw new IllegalStateException(ex.toString());
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91 public java.lang.Object newInstance(java.lang.Object parent) {
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95 desc.setHandler(handler);
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96 desc.setRequired(true);
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97 desc.setMultivalued(false);
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98 addFieldDescriptor(desc);
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100 //-- validation code for: _gapChar
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101 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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102 fieldValidator.setMinOccurs(1);
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104 org.exolab.castor.xml.validators.StringValidator typeValidator;
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105 typeValidator = new org.exolab.castor.xml.validators.StringValidator();
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106 fieldValidator.setValidator(typeValidator);
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107 typeValidator.setWhiteSpace("preserve");
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109 desc.setValidator(fieldValidator);
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110 //-- initialize element descriptors
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113 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.Sequence.class, "_sequenceList", "Sequence", org.exolab.castor.xml.NodeType.Element);
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114 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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115 public java.lang.Object getValue( java.lang.Object object )
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116 throws IllegalStateException
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118 SequenceSet target = (SequenceSet) object;
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119 return target.getSequence();
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121 public void setValue( java.lang.Object object, java.lang.Object value)
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122 throws IllegalStateException, IllegalArgumentException
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125 SequenceSet target = (SequenceSet) object;
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126 target.addSequence( (jalview.schemabinding.version2.Sequence) value);
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127 } catch (java.lang.Exception ex) {
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128 throw new IllegalStateException(ex.toString());
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131 public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
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133 SequenceSet target = (SequenceSet) object;
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134 target.removeAllSequence();
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135 } catch (java.lang.Exception ex) {
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136 throw new IllegalStateException(ex.toString());
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139 public java.lang.Object newInstance(java.lang.Object parent) {
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140 return new jalview.schemabinding.version2.Sequence();
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143 desc.setHandler(handler);
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144 desc.setNameSpaceURI("www.vamsas.ac.uk/jalview/version2");
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145 desc.setMultivalued(true);
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146 addFieldDescriptor(desc);
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148 //-- validation code for: _sequenceList
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149 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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150 fieldValidator.setMinOccurs(0);
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153 desc.setValidator(fieldValidator);
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154 //-- _annotationList
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155 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.Annotation.class, "_annotationList", "Annotation", org.exolab.castor.xml.NodeType.Element);
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156 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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157 public java.lang.Object getValue( java.lang.Object object )
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158 throws IllegalStateException
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160 SequenceSet target = (SequenceSet) object;
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161 return target.getAnnotation();
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163 public void setValue( java.lang.Object object, java.lang.Object value)
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164 throws IllegalStateException, IllegalArgumentException
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167 SequenceSet target = (SequenceSet) object;
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168 target.addAnnotation( (jalview.schemabinding.version2.Annotation) value);
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169 } catch (java.lang.Exception ex) {
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170 throw new IllegalStateException(ex.toString());
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173 public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
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175 SequenceSet target = (SequenceSet) object;
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176 target.removeAllAnnotation();
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177 } catch (java.lang.Exception ex) {
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178 throw new IllegalStateException(ex.toString());
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181 public java.lang.Object newInstance(java.lang.Object parent) {
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182 return new jalview.schemabinding.version2.Annotation();
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185 desc.setHandler(handler);
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186 desc.setNameSpaceURI("www.vamsas.ac.uk/jalview/version2");
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187 desc.setMultivalued(true);
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188 addFieldDescriptor(desc);
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190 //-- validation code for: _annotationList
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191 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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192 fieldValidator.setMinOccurs(0);
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195 desc.setValidator(fieldValidator);
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196 //-- _sequenceSetPropertiesList
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197 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.SequenceSetProperties.class, "_sequenceSetPropertiesList", "sequenceSetProperties", org.exolab.castor.xml.NodeType.Element);
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198 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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199 public java.lang.Object getValue( java.lang.Object object )
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200 throws IllegalStateException
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202 SequenceSet target = (SequenceSet) object;
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203 return target.getSequenceSetProperties();
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205 public void setValue( java.lang.Object object, java.lang.Object value)
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206 throws IllegalStateException, IllegalArgumentException
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209 SequenceSet target = (SequenceSet) object;
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210 target.addSequenceSetProperties( (jalview.schemabinding.version2.SequenceSetProperties) value);
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211 } catch (java.lang.Exception ex) {
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212 throw new IllegalStateException(ex.toString());
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215 public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
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217 SequenceSet target = (SequenceSet) object;
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218 target.removeAllSequenceSetProperties();
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219 } catch (java.lang.Exception ex) {
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220 throw new IllegalStateException(ex.toString());
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223 public java.lang.Object newInstance(java.lang.Object parent) {
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224 return new jalview.schemabinding.version2.SequenceSetProperties();
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227 desc.setHandler(handler);
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228 desc.setNameSpaceURI("www.vamsas.ac.uk/jalview/version2");
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229 desc.setMultivalued(true);
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230 addFieldDescriptor(desc);
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232 //-- validation code for: _sequenceSetPropertiesList
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233 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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234 fieldValidator.setMinOccurs(0);
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237 desc.setValidator(fieldValidator);
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246 * Method getAccessMode.
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248 * @return the access mode specified for this class.
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250 public org.exolab.castor.mapping.AccessMode getAccessMode(
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256 * Method getIdentity.
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258 * @return the identity field, null if this class has no
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261 public org.exolab.castor.mapping.FieldDescriptor getIdentity(
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267 * Method getJavaClass.
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269 * @return the Java class represented by this descriptor.
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271 public java.lang.Class getJavaClass(
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273 return jalview.schemabinding.version2.SequenceSet.class;
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277 * Method getNameSpacePrefix.
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279 * @return the namespace prefix to use when marshaling as XML.
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281 public java.lang.String getNameSpacePrefix(
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287 * Method getNameSpaceURI.
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289 * @return the namespace URI used when marshaling and
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290 * unmarshaling as XML.
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292 public java.lang.String getNameSpaceURI(
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298 * Method getValidator.
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300 * @return a specific validator for the class described by this
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303 public org.exolab.castor.xml.TypeValidator getValidator(
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309 * Method getXMLName.
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311 * @return the XML Name for the Class being described.
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313 public java.lang.String getXMLName(
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319 * Method isElementDefinition.
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321 * @return true if XML schema definition of this Class is that
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323 * element or element with anonymous type definition.
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325 public boolean isElementDefinition(
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327 return _elementDefinition;
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