2 * This class was automatically generated with
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3 * <a href="http://www.castor.org">Castor 1.1</a>, using an XML
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8 package jalview.schemabinding.version2.descriptors;
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10 //---------------------------------/
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11 //- Imported classes and packages -/
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12 //---------------------------------/
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14 import jalview.schemabinding.version2.SequenceSet;
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17 * Class SequenceSetDescriptor.
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19 * @version $Revision$ $Date$
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21 public class SequenceSetDescriptor extends org.exolab.castor.xml.util.XMLClassDescriptorImpl {
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24 //--------------------------/
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25 //- Class/Member Variables -/
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26 //--------------------------/
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29 * Field _elementDefinition.
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31 private boolean _elementDefinition;
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36 private java.lang.String _nsPrefix;
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41 private java.lang.String _nsURI;
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46 private java.lang.String _xmlName;
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53 public SequenceSetDescriptor() {
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55 _nsURI = "www.vamsas.ac.uk/jalview/version2";
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56 _xmlName = "SequenceSet";
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57 _elementDefinition = true;
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59 //-- set grouping compositor
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60 setCompositorAsSequence();
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61 org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null;
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62 org.exolab.castor.mapping.FieldHandler handler = null;
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63 org.exolab.castor.xml.FieldValidator fieldValidator = null;
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64 //-- initialize attribute descriptors
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67 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_gapChar", "gapChar", org.exolab.castor.xml.NodeType.Attribute);
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68 desc.setImmutable(true);
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69 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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70 public java.lang.Object getValue( java.lang.Object object )
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71 throws IllegalStateException
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73 SequenceSet target = (SequenceSet) object;
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74 return target.getGapChar();
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76 public void setValue( java.lang.Object object, java.lang.Object value)
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77 throws IllegalStateException, IllegalArgumentException
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80 SequenceSet target = (SequenceSet) object;
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81 target.setGapChar( (java.lang.String) value);
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82 } catch (java.lang.Exception ex) {
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83 throw new IllegalStateException(ex.toString());
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86 public java.lang.Object newInstance(java.lang.Object parent) {
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90 desc.setHandler(handler);
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91 desc.setRequired(true);
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92 desc.setMultivalued(false);
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93 addFieldDescriptor(desc);
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95 //-- validation code for: _gapChar
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96 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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97 fieldValidator.setMinOccurs(1);
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99 org.exolab.castor.xml.validators.StringValidator typeValidator;
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100 typeValidator = new org.exolab.castor.xml.validators.StringValidator();
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101 fieldValidator.setValidator(typeValidator);
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102 typeValidator.setWhiteSpace("preserve");
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104 desc.setValidator(fieldValidator);
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105 //-- initialize element descriptors
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108 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.Sequence.class, "_sequenceList", "Sequence", org.exolab.castor.xml.NodeType.Element);
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109 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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110 public java.lang.Object getValue( java.lang.Object object )
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111 throws IllegalStateException
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113 SequenceSet target = (SequenceSet) object;
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114 return target.getSequence();
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116 public void setValue( java.lang.Object object, java.lang.Object value)
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117 throws IllegalStateException, IllegalArgumentException
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120 SequenceSet target = (SequenceSet) object;
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121 target.addSequence( (jalview.schemabinding.version2.Sequence) value);
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122 } catch (java.lang.Exception ex) {
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123 throw new IllegalStateException(ex.toString());
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126 public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
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128 SequenceSet target = (SequenceSet) object;
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129 target.removeAllSequence();
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130 } catch (java.lang.Exception ex) {
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131 throw new IllegalStateException(ex.toString());
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134 public java.lang.Object newInstance(java.lang.Object parent) {
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135 return new jalview.schemabinding.version2.Sequence();
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138 desc.setHandler(handler);
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139 desc.setNameSpaceURI("www.vamsas.ac.uk/jalview/version2");
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140 desc.setMultivalued(true);
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141 addFieldDescriptor(desc);
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143 //-- validation code for: _sequenceList
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144 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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145 fieldValidator.setMinOccurs(0);
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148 desc.setValidator(fieldValidator);
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149 //-- _annotationList
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150 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.Annotation.class, "_annotationList", "Annotation", org.exolab.castor.xml.NodeType.Element);
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151 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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152 public java.lang.Object getValue( java.lang.Object object )
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153 throws IllegalStateException
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155 SequenceSet target = (SequenceSet) object;
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156 return target.getAnnotation();
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158 public void setValue( java.lang.Object object, java.lang.Object value)
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159 throws IllegalStateException, IllegalArgumentException
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162 SequenceSet target = (SequenceSet) object;
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163 target.addAnnotation( (jalview.schemabinding.version2.Annotation) value);
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164 } catch (java.lang.Exception ex) {
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165 throw new IllegalStateException(ex.toString());
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168 public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
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170 SequenceSet target = (SequenceSet) object;
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171 target.removeAllAnnotation();
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172 } catch (java.lang.Exception ex) {
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173 throw new IllegalStateException(ex.toString());
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176 public java.lang.Object newInstance(java.lang.Object parent) {
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177 return new jalview.schemabinding.version2.Annotation();
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180 desc.setHandler(handler);
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181 desc.setNameSpaceURI("www.vamsas.ac.uk/jalview/version2");
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182 desc.setMultivalued(true);
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183 addFieldDescriptor(desc);
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185 //-- validation code for: _annotationList
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186 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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187 fieldValidator.setMinOccurs(0);
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190 desc.setValidator(fieldValidator);
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191 //-- _sequenceSetPropertiesList
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192 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.SequenceSetProperties.class, "_sequenceSetPropertiesList", "sequenceSetProperties", org.exolab.castor.xml.NodeType.Element);
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193 handler = new org.exolab.castor.xml.XMLFieldHandler() {
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194 public java.lang.Object getValue( java.lang.Object object )
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195 throws IllegalStateException
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197 SequenceSet target = (SequenceSet) object;
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198 return target.getSequenceSetProperties();
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200 public void setValue( java.lang.Object object, java.lang.Object value)
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201 throws IllegalStateException, IllegalArgumentException
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204 SequenceSet target = (SequenceSet) object;
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205 target.addSequenceSetProperties( (jalview.schemabinding.version2.SequenceSetProperties) value);
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206 } catch (java.lang.Exception ex) {
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207 throw new IllegalStateException(ex.toString());
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210 public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
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212 SequenceSet target = (SequenceSet) object;
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213 target.removeAllSequenceSetProperties();
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214 } catch (java.lang.Exception ex) {
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215 throw new IllegalStateException(ex.toString());
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218 public java.lang.Object newInstance(java.lang.Object parent) {
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219 return new jalview.schemabinding.version2.SequenceSetProperties();
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222 desc.setHandler(handler);
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223 desc.setNameSpaceURI("www.vamsas.ac.uk/jalview/version2");
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224 desc.setMultivalued(true);
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225 addFieldDescriptor(desc);
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227 //-- validation code for: _sequenceSetPropertiesList
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228 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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229 fieldValidator.setMinOccurs(0);
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232 desc.setValidator(fieldValidator);
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241 * Method getAccessMode.
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243 * @return the access mode specified for this class.
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245 public org.exolab.castor.mapping.AccessMode getAccessMode(
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251 * Method getIdentity.
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253 * @return the identity field, null if this class has no
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256 public org.exolab.castor.mapping.FieldDescriptor getIdentity(
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258 return super.getIdentity();
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262 * Method getJavaClass.
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264 * @return the Java class represented by this descriptor.
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266 public java.lang.Class getJavaClass(
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268 return jalview.schemabinding.version2.SequenceSet.class;
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272 * Method getNameSpacePrefix.
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274 * @return the namespace prefix to use when marshaling as XML.
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276 public java.lang.String getNameSpacePrefix(
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282 * Method getNameSpaceURI.
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284 * @return the namespace URI used when marshaling and
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285 * unmarshaling as XML.
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287 public java.lang.String getNameSpaceURI(
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293 * Method getValidator.
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295 * @return a specific validator for the class described by this
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298 public org.exolab.castor.xml.TypeValidator getValidator(
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304 * Method getXMLName.
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306 * @return the XML Name for the Class being described.
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308 public java.lang.String getXMLName(
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314 * Method isElementDefinition.
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316 * @return true if XML schema definition of this Class is that
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318 * element or element with anonymous type definition.
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320 public boolean isElementDefinition(
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322 return _elementDefinition;
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