2 * Jalview - A Sequence Alignment Editor and Viewer (Version 2.4.1)
\r
3 * Copyright (C) 2009 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
\r
5 * This program is free software; you can redistribute it and/or
\r
6 * modify it under the terms of the GNU General Public License
\r
7 * as published by the Free Software Foundation; either version 2
\r
8 * of the License, or (at your option) any later version.
\r
10 * This program is distributed in the hope that it will be useful,
\r
11 * but WITHOUT ANY WARRANTY; without even the implied warranty of
\r
12 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
\r
13 * GNU General Public License for more details.
\r
15 * You should have received a copy of the GNU General Public License
\r
16 * along with this program; if not, write to the Free Software
\r
17 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
\r
19 package jalview.schemabinding.version2.descriptors;
\r
21 //---------------------------------/
\r
22 //- Imported classes and packages -/
\r
23 //---------------------------------/
\r
25 import jalview.schemabinding.version2.Setting;
\r
28 * Class SettingDescriptor.
\r
30 * @version $Revision$ $Date$
\r
32 public class SettingDescriptor extends org.exolab.castor.xml.util.XMLClassDescriptorImpl {
\r
35 //--------------------------/
\r
36 //- Class/Member Variables -/
\r
37 //--------------------------/
\r
40 * Field _elementDefinition.
\r
42 private boolean _elementDefinition;
\r
47 private java.lang.String _nsPrefix;
\r
52 private java.lang.String _nsURI;
\r
57 private java.lang.String _xmlName;
\r
64 public SettingDescriptor() {
\r
66 _nsURI = "www.jalview.org";
\r
67 _xmlName = "setting";
\r
68 _elementDefinition = true;
\r
69 org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null;
\r
70 org.exolab.castor.mapping.FieldHandler handler = null;
\r
71 org.exolab.castor.xml.FieldValidator fieldValidator = null;
\r
72 //-- initialize attribute descriptors
\r
75 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_type", "type", org.exolab.castor.xml.NodeType.Attribute);
\r
76 desc.setImmutable(true);
\r
77 handler = new org.exolab.castor.xml.XMLFieldHandler() {
\r
78 public java.lang.Object getValue( java.lang.Object object )
\r
79 throws IllegalStateException
\r
81 Setting target = (Setting) object;
\r
82 return target.getType();
\r
84 public void setValue( java.lang.Object object, java.lang.Object value)
\r
85 throws IllegalStateException, IllegalArgumentException
\r
88 Setting target = (Setting) object;
\r
89 target.setType( (java.lang.String) value);
\r
90 } catch (java.lang.Exception ex) {
\r
91 throw new IllegalStateException(ex.toString());
\r
94 public java.lang.Object newInstance(java.lang.Object parent) {
\r
98 desc.setHandler(handler);
\r
99 desc.setRequired(true);
\r
100 desc.setMultivalued(false);
\r
101 addFieldDescriptor(desc);
\r
103 //-- validation code for: _type
\r
104 fieldValidator = new org.exolab.castor.xml.FieldValidator();
\r
105 fieldValidator.setMinOccurs(1);
\r
107 org.exolab.castor.xml.validators.StringValidator typeValidator;
\r
108 typeValidator = new org.exolab.castor.xml.validators.StringValidator();
\r
109 fieldValidator.setValidator(typeValidator);
\r
110 typeValidator.setWhiteSpace("preserve");
\r
112 desc.setValidator(fieldValidator);
\r
114 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_colour", "colour", org.exolab.castor.xml.NodeType.Attribute);
\r
115 handler = new org.exolab.castor.xml.XMLFieldHandler() {
\r
116 public java.lang.Object getValue( java.lang.Object object )
\r
117 throws IllegalStateException
\r
119 Setting target = (Setting) object;
\r
120 if (!target.hasColour()) { return null; }
\r
121 return new java.lang.Integer(target.getColour());
\r
123 public void setValue( java.lang.Object object, java.lang.Object value)
\r
124 throws IllegalStateException, IllegalArgumentException
\r
127 Setting target = (Setting) object;
\r
128 // ignore null values for non optional primitives
\r
129 if (value == null) { return; }
\r
131 target.setColour( ((java.lang.Integer) value).intValue());
\r
132 } catch (java.lang.Exception ex) {
\r
133 throw new IllegalStateException(ex.toString());
\r
136 public java.lang.Object newInstance(java.lang.Object parent) {
\r
140 desc.setHandler(handler);
\r
141 desc.setRequired(true);
\r
142 desc.setMultivalued(false);
\r
143 addFieldDescriptor(desc);
\r
145 //-- validation code for: _colour
\r
146 fieldValidator = new org.exolab.castor.xml.FieldValidator();
\r
147 fieldValidator.setMinOccurs(1);
\r
149 org.exolab.castor.xml.validators.IntValidator typeValidator;
\r
150 typeValidator = new org.exolab.castor.xml.validators.IntValidator();
\r
151 fieldValidator.setValidator(typeValidator);
\r
152 typeValidator.setMinInclusive(-2147483648);
\r
153 typeValidator.setMaxInclusive(2147483647);
\r
155 desc.setValidator(fieldValidator);
\r
157 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Boolean.TYPE, "_display", "display", org.exolab.castor.xml.NodeType.Attribute);
\r
158 handler = new org.exolab.castor.xml.XMLFieldHandler() {
\r
159 public java.lang.Object getValue( java.lang.Object object )
\r
160 throws IllegalStateException
\r
162 Setting target = (Setting) object;
\r
163 if (!target.hasDisplay()) { return null; }
\r
164 return (target.getDisplay() ? java.lang.Boolean.TRUE : java.lang.Boolean.FALSE);
\r
166 public void setValue( java.lang.Object object, java.lang.Object value)
\r
167 throws IllegalStateException, IllegalArgumentException
\r
170 Setting target = (Setting) object;
\r
171 // ignore null values for non optional primitives
\r
172 if (value == null) { return; }
\r
174 target.setDisplay( ((java.lang.Boolean) value).booleanValue());
\r
175 } catch (java.lang.Exception ex) {
\r
176 throw new IllegalStateException(ex.toString());
\r
179 public java.lang.Object newInstance(java.lang.Object parent) {
\r
183 desc.setHandler(handler);
\r
184 desc.setRequired(true);
\r
185 desc.setMultivalued(false);
\r
186 addFieldDescriptor(desc);
\r
188 //-- validation code for: _display
\r
189 fieldValidator = new org.exolab.castor.xml.FieldValidator();
\r
190 fieldValidator.setMinOccurs(1);
\r
192 org.exolab.castor.xml.validators.BooleanValidator typeValidator;
\r
193 typeValidator = new org.exolab.castor.xml.validators.BooleanValidator();
\r
194 fieldValidator.setValidator(typeValidator);
\r
196 desc.setValidator(fieldValidator);
\r
198 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Float.TYPE, "_order", "order", org.exolab.castor.xml.NodeType.Attribute);
\r
199 handler = new org.exolab.castor.xml.XMLFieldHandler() {
\r
200 public java.lang.Object getValue( java.lang.Object object )
\r
201 throws IllegalStateException
\r
203 Setting target = (Setting) object;
\r
204 if (!target.hasOrder()) { return null; }
\r
205 return new java.lang.Float(target.getOrder());
\r
207 public void setValue( java.lang.Object object, java.lang.Object value)
\r
208 throws IllegalStateException, IllegalArgumentException
\r
211 Setting target = (Setting) object;
\r
212 // if null, use delete method for optional primitives
\r
213 if (value == null) {
\r
214 target.deleteOrder();
\r
217 target.setOrder( ((java.lang.Float) value).floatValue());
\r
218 } catch (java.lang.Exception ex) {
\r
219 throw new IllegalStateException(ex.toString());
\r
222 public java.lang.Object newInstance(java.lang.Object parent) {
\r
226 desc.setHandler(handler);
\r
227 desc.setMultivalued(false);
\r
228 addFieldDescriptor(desc);
\r
230 //-- validation code for: _order
\r
231 fieldValidator = new org.exolab.castor.xml.FieldValidator();
\r
233 org.exolab.castor.xml.validators.FloatValidator typeValidator;
\r
234 typeValidator = new org.exolab.castor.xml.validators.FloatValidator();
\r
235 fieldValidator.setValidator(typeValidator);
\r
236 typeValidator.setMinInclusive((float) -3.4028235E38);
\r
237 typeValidator.setMaxInclusive((float) 3.4028235E38);
\r
239 desc.setValidator(fieldValidator);
\r
241 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_mincolour", "mincolour", org.exolab.castor.xml.NodeType.Attribute);
\r
242 handler = new org.exolab.castor.xml.XMLFieldHandler() {
\r
243 public java.lang.Object getValue( java.lang.Object object )
\r
244 throws IllegalStateException
\r
246 Setting target = (Setting) object;
\r
247 if (!target.hasMincolour()) { return null; }
\r
248 return new java.lang.Integer(target.getMincolour());
\r
250 public void setValue( java.lang.Object object, java.lang.Object value)
\r
251 throws IllegalStateException, IllegalArgumentException
\r
254 Setting target = (Setting) object;
\r
255 // if null, use delete method for optional primitives
\r
256 if (value == null) {
\r
257 target.deleteMincolour();
\r
260 target.setMincolour( ((java.lang.Integer) value).intValue());
\r
261 } catch (java.lang.Exception ex) {
\r
262 throw new IllegalStateException(ex.toString());
\r
265 public java.lang.Object newInstance(java.lang.Object parent) {
\r
269 desc.setHandler(handler);
\r
270 desc.setMultivalued(false);
\r
271 addFieldDescriptor(desc);
\r
273 //-- validation code for: _mincolour
\r
274 fieldValidator = new org.exolab.castor.xml.FieldValidator();
\r
276 org.exolab.castor.xml.validators.IntValidator typeValidator;
\r
277 typeValidator = new org.exolab.castor.xml.validators.IntValidator();
\r
278 fieldValidator.setValidator(typeValidator);
\r
279 typeValidator.setMinInclusive(-2147483648);
\r
280 typeValidator.setMaxInclusive(2147483647);
\r
282 desc.setValidator(fieldValidator);
\r
284 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Float.TYPE, "_threshold", "threshold", org.exolab.castor.xml.NodeType.Attribute);
\r
285 handler = new org.exolab.castor.xml.XMLFieldHandler() {
\r
286 public java.lang.Object getValue( java.lang.Object object )
\r
287 throws IllegalStateException
\r
289 Setting target = (Setting) object;
\r
290 if (!target.hasThreshold()) { return null; }
\r
291 return new java.lang.Float(target.getThreshold());
\r
293 public void setValue( java.lang.Object object, java.lang.Object value)
\r
294 throws IllegalStateException, IllegalArgumentException
\r
297 Setting target = (Setting) object;
\r
298 // if null, use delete method for optional primitives
\r
299 if (value == null) {
\r
300 target.deleteThreshold();
\r
303 target.setThreshold( ((java.lang.Float) value).floatValue());
\r
304 } catch (java.lang.Exception ex) {
\r
305 throw new IllegalStateException(ex.toString());
\r
308 public java.lang.Object newInstance(java.lang.Object parent) {
\r
312 desc.setHandler(handler);
\r
313 desc.setMultivalued(false);
\r
314 addFieldDescriptor(desc);
\r
316 //-- validation code for: _threshold
\r
317 fieldValidator = new org.exolab.castor.xml.FieldValidator();
\r
319 org.exolab.castor.xml.validators.FloatValidator typeValidator;
\r
320 typeValidator = new org.exolab.castor.xml.validators.FloatValidator();
\r
321 fieldValidator.setValidator(typeValidator);
\r
322 typeValidator.setMinInclusive((float) -3.4028235E38);
\r
323 typeValidator.setMaxInclusive((float) 3.4028235E38);
\r
325 desc.setValidator(fieldValidator);
\r
327 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_threshstate", "threshstate", org.exolab.castor.xml.NodeType.Attribute);
\r
328 handler = new org.exolab.castor.xml.XMLFieldHandler() {
\r
329 public java.lang.Object getValue( java.lang.Object object )
\r
330 throws IllegalStateException
\r
332 Setting target = (Setting) object;
\r
333 if (!target.hasThreshstate()) { return null; }
\r
334 return new java.lang.Integer(target.getThreshstate());
\r
336 public void setValue( java.lang.Object object, java.lang.Object value)
\r
337 throws IllegalStateException, IllegalArgumentException
\r
340 Setting target = (Setting) object;
\r
341 // if null, use delete method for optional primitives
\r
342 if (value == null) {
\r
343 target.deleteThreshstate();
\r
346 target.setThreshstate( ((java.lang.Integer) value).intValue());
\r
347 } catch (java.lang.Exception ex) {
\r
348 throw new IllegalStateException(ex.toString());
\r
351 public java.lang.Object newInstance(java.lang.Object parent) {
\r
355 desc.setHandler(handler);
\r
356 desc.setMultivalued(false);
\r
357 addFieldDescriptor(desc);
\r
359 //-- validation code for: _threshstate
\r
360 fieldValidator = new org.exolab.castor.xml.FieldValidator();
\r
362 org.exolab.castor.xml.validators.IntValidator typeValidator;
\r
363 typeValidator = new org.exolab.castor.xml.validators.IntValidator();
\r
364 fieldValidator.setValidator(typeValidator);
\r
365 typeValidator.setMinInclusive(-2147483648);
\r
366 typeValidator.setMaxInclusive(2147483647);
\r
368 desc.setValidator(fieldValidator);
\r
370 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Float.TYPE, "_max", "max", org.exolab.castor.xml.NodeType.Attribute);
\r
371 handler = new org.exolab.castor.xml.XMLFieldHandler() {
\r
372 public java.lang.Object getValue( java.lang.Object object )
\r
373 throws IllegalStateException
\r
375 Setting target = (Setting) object;
\r
376 if (!target.hasMax()) { return null; }
\r
377 return new java.lang.Float(target.getMax());
\r
379 public void setValue( java.lang.Object object, java.lang.Object value)
\r
380 throws IllegalStateException, IllegalArgumentException
\r
383 Setting target = (Setting) object;
\r
384 // if null, use delete method for optional primitives
\r
385 if (value == null) {
\r
386 target.deleteMax();
\r
389 target.setMax( ((java.lang.Float) value).floatValue());
\r
390 } catch (java.lang.Exception ex) {
\r
391 throw new IllegalStateException(ex.toString());
\r
394 public java.lang.Object newInstance(java.lang.Object parent) {
\r
398 desc.setHandler(handler);
\r
399 desc.setMultivalued(false);
\r
400 addFieldDescriptor(desc);
\r
402 //-- validation code for: _max
\r
403 fieldValidator = new org.exolab.castor.xml.FieldValidator();
\r
405 org.exolab.castor.xml.validators.FloatValidator typeValidator;
\r
406 typeValidator = new org.exolab.castor.xml.validators.FloatValidator();
\r
407 fieldValidator.setValidator(typeValidator);
\r
408 typeValidator.setMinInclusive((float) -3.4028235E38);
\r
409 typeValidator.setMaxInclusive((float) 3.4028235E38);
\r
411 desc.setValidator(fieldValidator);
\r
413 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Float.TYPE, "_min", "min", org.exolab.castor.xml.NodeType.Attribute);
\r
414 handler = new org.exolab.castor.xml.XMLFieldHandler() {
\r
415 public java.lang.Object getValue( java.lang.Object object )
\r
416 throws IllegalStateException
\r
418 Setting target = (Setting) object;
\r
419 if (!target.hasMin()) { return null; }
\r
420 return new java.lang.Float(target.getMin());
\r
422 public void setValue( java.lang.Object object, java.lang.Object value)
\r
423 throws IllegalStateException, IllegalArgumentException
\r
426 Setting target = (Setting) object;
\r
427 // if null, use delete method for optional primitives
\r
428 if (value == null) {
\r
429 target.deleteMin();
\r
432 target.setMin( ((java.lang.Float) value).floatValue());
\r
433 } catch (java.lang.Exception ex) {
\r
434 throw new IllegalStateException(ex.toString());
\r
437 public java.lang.Object newInstance(java.lang.Object parent) {
\r
441 desc.setHandler(handler);
\r
442 desc.setMultivalued(false);
\r
443 addFieldDescriptor(desc);
\r
445 //-- validation code for: _min
\r
446 fieldValidator = new org.exolab.castor.xml.FieldValidator();
\r
448 org.exolab.castor.xml.validators.FloatValidator typeValidator;
\r
449 typeValidator = new org.exolab.castor.xml.validators.FloatValidator();
\r
450 fieldValidator.setValidator(typeValidator);
\r
451 typeValidator.setMinInclusive((float) -3.4028235E38);
\r
452 typeValidator.setMaxInclusive((float) 3.4028235E38);
\r
454 desc.setValidator(fieldValidator);
\r
455 //-- _colourByLabel
\r
456 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Boolean.TYPE, "_colourByLabel", "colourByLabel", org.exolab.castor.xml.NodeType.Attribute);
\r
457 handler = new org.exolab.castor.xml.XMLFieldHandler() {
\r
458 public java.lang.Object getValue( java.lang.Object object )
\r
459 throws IllegalStateException
\r
461 Setting target = (Setting) object;
\r
462 if (!target.hasColourByLabel()) { return null; }
\r
463 return (target.getColourByLabel() ? java.lang.Boolean.TRUE : java.lang.Boolean.FALSE);
\r
465 public void setValue( java.lang.Object object, java.lang.Object value)
\r
466 throws IllegalStateException, IllegalArgumentException
\r
469 Setting target = (Setting) object;
\r
470 // if null, use delete method for optional primitives
\r
471 if (value == null) {
\r
472 target.deleteColourByLabel();
\r
475 target.setColourByLabel( ((java.lang.Boolean) value).booleanValue());
\r
476 } catch (java.lang.Exception ex) {
\r
477 throw new IllegalStateException(ex.toString());
\r
480 public java.lang.Object newInstance(java.lang.Object parent) {
\r
484 desc.setHandler(handler);
\r
485 desc.setMultivalued(false);
\r
486 addFieldDescriptor(desc);
\r
488 //-- validation code for: _colourByLabel
\r
489 fieldValidator = new org.exolab.castor.xml.FieldValidator();
\r
491 org.exolab.castor.xml.validators.BooleanValidator typeValidator;
\r
492 typeValidator = new org.exolab.castor.xml.validators.BooleanValidator();
\r
493 fieldValidator.setValidator(typeValidator);
\r
495 desc.setValidator(fieldValidator);
\r
497 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Boolean.TYPE, "_autoScale", "autoScale", org.exolab.castor.xml.NodeType.Attribute);
\r
498 handler = new org.exolab.castor.xml.XMLFieldHandler() {
\r
499 public java.lang.Object getValue( java.lang.Object object )
\r
500 throws IllegalStateException
\r
502 Setting target = (Setting) object;
\r
503 if (!target.hasAutoScale()) { return null; }
\r
504 return (target.getAutoScale() ? java.lang.Boolean.TRUE : java.lang.Boolean.FALSE);
\r
506 public void setValue( java.lang.Object object, java.lang.Object value)
\r
507 throws IllegalStateException, IllegalArgumentException
\r
510 Setting target = (Setting) object;
\r
511 // if null, use delete method for optional primitives
\r
512 if (value == null) {
\r
513 target.deleteAutoScale();
\r
516 target.setAutoScale( ((java.lang.Boolean) value).booleanValue());
\r
517 } catch (java.lang.Exception ex) {
\r
518 throw new IllegalStateException(ex.toString());
\r
521 public java.lang.Object newInstance(java.lang.Object parent) {
\r
525 desc.setHandler(handler);
\r
526 desc.setMultivalued(false);
\r
527 addFieldDescriptor(desc);
\r
529 //-- validation code for: _autoScale
\r
530 fieldValidator = new org.exolab.castor.xml.FieldValidator();
\r
532 org.exolab.castor.xml.validators.BooleanValidator typeValidator;
\r
533 typeValidator = new org.exolab.castor.xml.validators.BooleanValidator();
\r
534 fieldValidator.setValidator(typeValidator);
\r
536 desc.setValidator(fieldValidator);
\r
537 //-- initialize element descriptors
\r
547 * Method getAccessMode.
\r
549 * @return the access mode specified for this class.
\r
551 public org.exolab.castor.mapping.AccessMode getAccessMode(
\r
557 * Method getIdentity.
\r
559 * @return the identity field, null if this class has no
\r
562 public org.exolab.castor.mapping.FieldDescriptor getIdentity(
\r
564 return super.getIdentity();
\r
568 * Method getJavaClass.
\r
570 * @return the Java class represented by this descriptor.
\r
572 public java.lang.Class getJavaClass(
\r
574 return jalview.schemabinding.version2.Setting.class;
\r
578 * Method getNameSpacePrefix.
\r
580 * @return the namespace prefix to use when marshaling as XML.
\r
582 public java.lang.String getNameSpacePrefix(
\r
588 * Method getNameSpaceURI.
\r
590 * @return the namespace URI used when marshaling and
\r
591 * unmarshaling as XML.
\r
593 public java.lang.String getNameSpaceURI(
\r
599 * Method getValidator.
\r
601 * @return a specific validator for the class described by this
\r
604 public org.exolab.castor.xml.TypeValidator getValidator(
\r
610 * Method getXMLName.
\r
612 * @return the XML Name for the Class being described.
\r
614 public java.lang.String getXMLName(
\r
620 * Method isElementDefinition.
\r
622 * @return true if XML schema definition of this Class is that
\r
624 * element or element with anonymous type definition.
\r
626 public boolean isElementDefinition(
\r
628 return _elementDefinition;
\r