1 /*******************************************************************************
2 * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
3 * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle
5 * This file is part of Jalview.
7 * Jalview is free software: you can redistribute it and/or
8 * modify it under the terms of the GNU General Public License
9 * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
11 * Jalview is distributed in the hope that it will be useful, but
12 * WITHOUT ANY WARRANTY; without even the implied warranty
13 * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
14 * PURPOSE. See the GNU General Public License for more details.
16 * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
17 *******************************************************************************/
19 * This class was automatically generated with
20 * <a href="http://www.castor.org">Castor 1.1</a>, using an XML
25 package jalview.schemabinding.version2.descriptors;
27 //---------------------------------/
28 //- Imported classes and packages -/
29 //---------------------------------/
31 import jalview.schemabinding.version2.VAMSAS;
34 * Class VAMSASDescriptor.
36 * @version $Revision$ $Date$
38 public class VAMSASDescriptor extends org.exolab.castor.xml.util.XMLClassDescriptorImpl {
41 //--------------------------/
42 //- Class/Member Variables -/
43 //--------------------------/
46 * Field _elementDefinition.
48 private boolean _elementDefinition;
53 private java.lang.String _nsPrefix;
58 private java.lang.String _nsURI;
63 private java.lang.String _xmlName;
70 public VAMSASDescriptor() {
72 _nsURI = "www.vamsas.ac.uk/jalview/version2";
74 _elementDefinition = false;
76 //-- set grouping compositor
77 setCompositorAsSequence();
78 org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null;
79 org.exolab.castor.mapping.FieldHandler handler = null;
80 org.exolab.castor.xml.FieldValidator fieldValidator = null;
81 //-- initialize attribute descriptors
83 //-- initialize element descriptors
86 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_treeList", "Tree", org.exolab.castor.xml.NodeType.Element);
87 desc.setImmutable(true);
88 handler = new org.exolab.castor.xml.XMLFieldHandler() {
89 public java.lang.Object getValue( java.lang.Object object )
90 throws IllegalStateException
92 VAMSAS target = (VAMSAS) object;
93 return target.getTree();
95 public void setValue( java.lang.Object object, java.lang.Object value)
96 throws IllegalStateException, IllegalArgumentException
99 VAMSAS target = (VAMSAS) object;
100 target.addTree( (java.lang.String) value);
101 } catch (java.lang.Exception ex) {
102 throw new IllegalStateException(ex.toString());
105 public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
107 VAMSAS target = (VAMSAS) object;
108 target.removeAllTree();
109 } catch (java.lang.Exception ex) {
110 throw new IllegalStateException(ex.toString());
113 public java.lang.Object newInstance(java.lang.Object parent) {
117 desc.setHandler(handler);
118 desc.setNameSpaceURI("www.vamsas.ac.uk/jalview/version2");
119 desc.setMultivalued(true);
120 addFieldDescriptor(desc);
122 //-- validation code for: _treeList
123 fieldValidator = new org.exolab.castor.xml.FieldValidator();
124 fieldValidator.setMinOccurs(0);
126 org.exolab.castor.xml.validators.StringValidator typeValidator;
127 typeValidator = new org.exolab.castor.xml.validators.StringValidator();
128 fieldValidator.setValidator(typeValidator);
129 typeValidator.setWhiteSpace("preserve");
131 desc.setValidator(fieldValidator);
132 //-- _sequenceSetList
133 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.SequenceSet.class, "_sequenceSetList", "SequenceSet", org.exolab.castor.xml.NodeType.Element);
134 handler = new org.exolab.castor.xml.XMLFieldHandler() {
135 public java.lang.Object getValue( java.lang.Object object )
136 throws IllegalStateException
138 VAMSAS target = (VAMSAS) object;
139 return target.getSequenceSet();
141 public void setValue( java.lang.Object object, java.lang.Object value)
142 throws IllegalStateException, IllegalArgumentException
145 VAMSAS target = (VAMSAS) object;
146 target.addSequenceSet( (jalview.schemabinding.version2.SequenceSet) value);
147 } catch (java.lang.Exception ex) {
148 throw new IllegalStateException(ex.toString());
151 public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
153 VAMSAS target = (VAMSAS) object;
154 target.removeAllSequenceSet();
155 } catch (java.lang.Exception ex) {
156 throw new IllegalStateException(ex.toString());
159 public java.lang.Object newInstance(java.lang.Object parent) {
160 return new jalview.schemabinding.version2.SequenceSet();
163 desc.setHandler(handler);
164 desc.setNameSpaceURI("www.vamsas.ac.uk/jalview/version2");
165 desc.setMultivalued(true);
166 addFieldDescriptor(desc);
168 //-- validation code for: _sequenceSetList
169 fieldValidator = new org.exolab.castor.xml.FieldValidator();
170 fieldValidator.setMinOccurs(0);
173 desc.setValidator(fieldValidator);
182 * Method getAccessMode.
184 * @return the access mode specified for this class.
186 public org.exolab.castor.mapping.AccessMode getAccessMode(
192 * Method getIdentity.
194 * @return the identity field, null if this class has no
197 public org.exolab.castor.mapping.FieldDescriptor getIdentity(
199 return super.getIdentity();
203 * Method getJavaClass.
205 * @return the Java class represented by this descriptor.
207 public java.lang.Class getJavaClass(
209 return jalview.schemabinding.version2.VAMSAS.class;
213 * Method getNameSpacePrefix.
215 * @return the namespace prefix to use when marshaling as XML.
217 public java.lang.String getNameSpacePrefix(
223 * Method getNameSpaceURI.
225 * @return the namespace URI used when marshaling and
226 * unmarshaling as XML.
228 public java.lang.String getNameSpaceURI(
234 * Method getValidator.
236 * @return a specific validator for the class described by this
239 public org.exolab.castor.xml.TypeValidator getValidator(
247 * @return the XML Name for the Class being described.
249 public java.lang.String getXMLName(
255 * Method isElementDefinition.
257 * @return true if XML schema definition of this Class is that
259 * element or element with anonymous type definition.
261 public boolean isElementDefinition(
263 return _elementDefinition;