1 /*******************************************************************************
2 * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.1)
3 * Copyright (C) 2014 The Jalview Authors
5 * This file is part of Jalview.
7 * Jalview is free software: you can redistribute it and/or
8 * modify it under the terms of the GNU General Public License
9 * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
11 * Jalview is distributed in the hope that it will be useful, but
12 * WITHOUT ANY WARRANTY; without even the implied warranty
13 * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
14 * PURPOSE. See the GNU General Public License for more details.
16 * You should have received a copy of the GNU General Public License along with Jalview.
17 * If not, see <http://www.gnu.org/licenses/>.
18 * The Jalview Authors are detailed in the 'AUTHORS' file.
19 ******************************************************************************/
21 * This class was automatically generated with
22 * <a href="http://www.castor.org">Castor 1.1</a>, using an XML
27 package jalview.schemabinding.version2.descriptors;
29 //---------------------------------/
30 //- Imported classes and packages -/
31 //---------------------------------/
33 import jalview.schemabinding.version2.VAMSAS;
36 * Class VAMSASDescriptor.
38 * @version $Revision$ $Date$
40 public class VAMSASDescriptor extends
41 org.exolab.castor.xml.util.XMLClassDescriptorImpl
44 // --------------------------/
45 // - Class/Member Variables -/
46 // --------------------------/
49 * Field _elementDefinition.
51 private boolean _elementDefinition;
56 private java.lang.String _nsPrefix;
61 private java.lang.String _nsURI;
66 private java.lang.String _xmlName;
72 public VAMSASDescriptor()
75 _nsURI = "www.vamsas.ac.uk/jalview/version2";
77 _elementDefinition = false;
79 // -- set grouping compositor
80 setCompositorAsSequence();
81 org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null;
82 org.exolab.castor.mapping.FieldHandler handler = null;
83 org.exolab.castor.xml.FieldValidator fieldValidator = null;
84 // -- initialize attribute descriptors
86 // -- initialize element descriptors
89 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
90 java.lang.String.class, "_treeList", "Tree",
91 org.exolab.castor.xml.NodeType.Element);
92 desc.setImmutable(true);
93 handler = new org.exolab.castor.xml.XMLFieldHandler()
95 public java.lang.Object getValue(java.lang.Object object)
96 throws IllegalStateException
98 VAMSAS target = (VAMSAS) object;
99 return target.getTree();
102 public void setValue(java.lang.Object object, java.lang.Object value)
103 throws IllegalStateException, IllegalArgumentException
107 VAMSAS target = (VAMSAS) object;
108 target.addTree((java.lang.String) value);
109 } catch (java.lang.Exception ex)
111 throw new IllegalStateException(ex.toString());
115 public void resetValue(Object object) throws IllegalStateException,
116 IllegalArgumentException
120 VAMSAS target = (VAMSAS) object;
121 target.removeAllTree();
122 } catch (java.lang.Exception ex)
124 throw new IllegalStateException(ex.toString());
128 public java.lang.Object newInstance(java.lang.Object parent)
133 desc.setHandler(handler);
134 desc.setNameSpaceURI("www.vamsas.ac.uk/jalview/version2");
135 desc.setMultivalued(true);
136 addFieldDescriptor(desc);
138 // -- validation code for: _treeList
139 fieldValidator = new org.exolab.castor.xml.FieldValidator();
140 fieldValidator.setMinOccurs(0);
142 org.exolab.castor.xml.validators.StringValidator typeValidator;
143 typeValidator = new org.exolab.castor.xml.validators.StringValidator();
144 fieldValidator.setValidator(typeValidator);
145 typeValidator.setWhiteSpace("preserve");
147 desc.setValidator(fieldValidator);
148 // -- _sequenceSetList
149 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
150 jalview.schemabinding.version2.SequenceSet.class,
151 "_sequenceSetList", "SequenceSet",
152 org.exolab.castor.xml.NodeType.Element);
153 handler = new org.exolab.castor.xml.XMLFieldHandler()
155 public java.lang.Object getValue(java.lang.Object object)
156 throws IllegalStateException
158 VAMSAS target = (VAMSAS) object;
159 return target.getSequenceSet();
162 public void setValue(java.lang.Object object, java.lang.Object value)
163 throws IllegalStateException, IllegalArgumentException
167 VAMSAS target = (VAMSAS) object;
168 target.addSequenceSet((jalview.schemabinding.version2.SequenceSet) value);
169 } catch (java.lang.Exception ex)
171 throw new IllegalStateException(ex.toString());
175 public void resetValue(Object object) throws IllegalStateException,
176 IllegalArgumentException
180 VAMSAS target = (VAMSAS) object;
181 target.removeAllSequenceSet();
182 } catch (java.lang.Exception ex)
184 throw new IllegalStateException(ex.toString());
188 public java.lang.Object newInstance(java.lang.Object parent)
190 return new jalview.schemabinding.version2.SequenceSet();
193 desc.setHandler(handler);
194 desc.setNameSpaceURI("www.vamsas.ac.uk/jalview/version2");
195 desc.setMultivalued(true);
196 addFieldDescriptor(desc);
198 // -- validation code for: _sequenceSetList
199 fieldValidator = new org.exolab.castor.xml.FieldValidator();
200 fieldValidator.setMinOccurs(0);
203 desc.setValidator(fieldValidator);
211 * Method getAccessMode.
213 * @return the access mode specified for this class.
215 public org.exolab.castor.mapping.AccessMode getAccessMode()
221 * Method getIdentity.
223 * @return the identity field, null if this class has no identity.
225 public org.exolab.castor.mapping.FieldDescriptor getIdentity()
227 return super.getIdentity();
231 * Method getJavaClass.
233 * @return the Java class represented by this descriptor.
235 public java.lang.Class getJavaClass()
237 return jalview.schemabinding.version2.VAMSAS.class;
241 * Method getNameSpacePrefix.
243 * @return the namespace prefix to use when marshaling as XML.
245 public java.lang.String getNameSpacePrefix()
251 * Method getNameSpaceURI.
253 * @return the namespace URI used when marshaling and unmarshaling as XML.
255 public java.lang.String getNameSpaceURI()
261 * Method getValidator.
263 * @return a specific validator for the class described by this
266 public org.exolab.castor.xml.TypeValidator getValidator()
274 * @return the XML Name for the Class being described.
276 public java.lang.String getXMLName()
282 * Method isElementDefinition.
284 * @return true if XML schema definition of this Class is that of a global
285 * element or element with anonymous type definition.
287 public boolean isElementDefinition()
289 return _elementDefinition;