1 package jalview.structure;
4 * Java bean representing an atom in a PDB (or similar) structure model or
12 // TODO clarify do we want pdbFile here, or pdbId?
13 // compare highlightAtom in 2.8.2 for JalviewJmolBinding and
14 // javascript.MouseOverStructureListener
15 private String pdbFile;
19 private int pdbResNum;
21 private int atomIndex;
31 public AtomSpec(String pdbFile, String chain, int resNo, int atomNo)
33 this.pdbFile = pdbFile;
35 this.pdbResNum = resNo;
36 this.atomIndex = atomNo;
39 public String getPdbFile()
44 public String getChain()
49 public int getPdbResNum()
54 public int getAtomIndex()
60 public String toString()
62 return "pdbFile: " + pdbFile + ", chain: " + chain + ", res: "
63 + pdbResNum + ", atom: " + atomIndex;