2 * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8)
3 * Copyright (C) 2012 J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle
5 * This file is part of Jalview.
7 * Jalview is free software: you can redistribute it and/or
8 * modify it under the terms of the GNU General Public License
9 * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
11 * Jalview is distributed in the hope that it will be useful, but
12 * WITHOUT ANY WARRANTY; without even the implied warranty
13 * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
14 * PURPOSE. See the GNU General Public License for more details.
16 * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
18 package jalview.structure;
21 * holder for script commands generated for a particular structure mapping
26 public class StructureMappingcommandSet
29 * structure file for which these commands were generated
31 public String mapping;
36 public String[] commands;
39 * some object that indicates what the commands can be parsed by (eg
40 * JmolCommands.class implies these are Jmol commands)
42 public Object handledBy;
45 * record the originating command generator, the structure mapping involved,
46 * and the set of commands to be passed.
52 public StructureMappingcommandSet(Object handledBy, String files,
56 this.handledBy = handledBy;
57 this.commands = commands;