2 * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3 * Copyright (C) $$Year-Rel$$ The Jalview Authors
5 * This file is part of Jalview.
7 * Jalview is free software: you can redistribute it and/or
8 * modify it under the terms of the GNU General Public License
9 * as published by the Free Software Foundation, either version 3
10 * of the License, or (at your option) any later version.
12 * Jalview is distributed in the hope that it will be useful, but
13 * WITHOUT ANY WARRANTY; without even the implied warranty
14 * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15 * PURPOSE. See the GNU General Public License for more details.
17 * You should have received a copy of the GNU General Public License
18 * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19 * The Jalview Authors are detailed in the 'AUTHORS' file.
21 package jalview.viewmodel.seqfeatures;
23 import jalview.api.FeaturesDisplayedI;
25 import java.util.Collection;
26 import java.util.Collections;
27 import java.util.HashSet;
30 public class FeaturesDisplayed implements FeaturesDisplayedI
32 private Set<String> featuresDisplayed = new HashSet<String>();
34 private Set<String> featuresRegistered = new HashSet<String>();
36 public FeaturesDisplayed(FeaturesDisplayedI featuresDisplayed2)
38 Set<String> fdisp = featuresDisplayed2.getVisibleFeatures();
39 for (String ftype : fdisp)
41 featuresDisplayed.add(ftype);
42 featuresRegistered.add(ftype);
46 public FeaturesDisplayed()
51 public Set<String> getVisibleFeatures()
53 return Collections.unmodifiableSet(featuresDisplayed);
57 public boolean isVisible(String featureType)
59 return featuresDisplayed.contains(featureType);
63 public boolean areVisible(Collection<String> featureTypes)
65 return featuresDisplayed.containsAll(featureTypes);
71 featuresDisplayed.clear();
72 featuresRegistered.clear();
76 public void setAllVisible(Collection<String> makeVisible)
78 featuresDisplayed.addAll(makeVisible);
79 featuresRegistered.addAll(makeVisible);
83 public void setAllRegisteredVisible()
85 featuresDisplayed.addAll(featuresRegistered);
89 public void setVisible(String featureType)
91 featuresDisplayed.add(featureType);
92 featuresRegistered.add(featureType);
96 public boolean isRegistered(String type)
98 return featuresRegistered.contains(type);
102 public int getVisibleFeatureCount()
104 return featuresDisplayed.size();
108 public int getRegisteredFeaturesCount()
110 return featuresRegistered.size();