69b5e23e7ff1a67623ea3862d25afd1558127667
[jalview.git] / src / jalview / ws / MsaWServices.java
1 package jalview.ws;
2 import java.util.Hashtable;
3 /**
4  * <p>Title: MsaWServices </p>
5  *
6  * <p>Description: Registry of MsaWSI style services </p>
7  *
8  * <p>Copyright: Copyright (c) 2004</p>
9  *
10  * <p>Company: Dundee University</p>
11  *
12  * @author not attributable
13  * @version 1.0
14  */
15 /**
16  * TODO: MsaWServices will be set from properties and be dynamically discovered.
17  */
18 public class MsaWServices {
19   public static Hashtable info;
20   static
21   {
22     info = new Hashtable();
23     info.put("ClustalWS",
24              new String[]
25              {
26              "http://www.compbio.dundee.ac.uk/JalviewWS/services/ClustalWS",
27              "ClustalW Alignment job",
28              "\"Thompson, J.D., Higgins, D.G. and Gibson, T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple" +
29              " sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice."
30              + " Nucleic Acids Research, submitted, June 1994."
31     });
32     info.put("MuscleWS",
33              new String[]
34              {
35              "http://www.compbio.dundee.ac.uk/JalviewWS/services/MuscleWS",
36              "Muscle Alignment job",
37              "Edgar, Robert C. (2004), MUSCLE: multiple sequence alignment "
38              +
39              "with high accuracy and high throughput, Nucleic Acids Research 32(5), 1792-97."
40     });
41   };
42 }