2 * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
3 * Copyright (C) $$Year-Rel$$ The Jalview Authors
5 * This file is part of Jalview.
7 * Jalview is free software: you can redistribute it and/or
8 * modify it under the terms of the GNU General Public License
9 * as published by the Free Software Foundation, either version 3
10 * of the License, or (at your option) any later version.
12 * Jalview is distributed in the hope that it will be useful, but
13 * WITHOUT ANY WARRANTY; without even the implied warranty
14 * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
15 * PURPOSE. See the GNU General Public License for more details.
17 * You should have received a copy of the GNU General Public License
18 * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
19 * The Jalview Authors are detailed in the 'AUTHORS' file.
21 package jalview.ws.jws2;
23 import jalview.util.MessageManager;
24 import jalview.ws.jws2.jabaws2.Jws2Instance;
25 import jalview.ws.params.ArgumentI;
26 import jalview.ws.params.WsParamSetI;
28 import java.util.List;
30 import compbio.metadata.Preset;
32 public class JabaPreset implements WsParamSetI
38 public JabaPreset(Jws2Instance svc, Preset preset)
45 public String getName()
51 public String getDescription()
53 return p.getDescription();
57 public String[] getApplicableUrls()
59 return new String[] { service.getUri() };
63 public String getSourceFile()
69 public boolean isModifiable()
75 public void setSourceFile(String newfile)
77 throw new Error(MessageManager
78 .formatMessage("error.cannot_set_source_file_for", new String[]
79 { getClass().toString() }));
83 public List<ArgumentI> getArguments()
87 return JabaParamStore.getJwsArgsfromJaba(
88 p.getArguments(service.getRunnerConfig()));
92 throw new Error(MessageManager
93 .getString("error.mismatch_service_instance_preset"));
98 public void setArguments(List<ArgumentI> args)
100 throw new Error(MessageManager
101 .getString("error.cannot_set_params_for_ws_preset"));