src/jalview/ws2/gui/AnnotationServiceGuiHandler.java

   1 package jalview.ws2.gui;
   2
   3 import java.util.List;
   4
   5 import jalview.api.FeatureColourI;
   6 import jalview.datamodel.features.FeatureMatcherSetI;
   7 import jalview.gui.AlignFrame;
   8 import jalview.gui.AlignmentPanel;
   9 import jalview.gui.IProgressIndicator;
  10 import jalview.gui.IProgressIndicatorHandler;
  11 import jalview.schemes.FeatureSettingsAdapter;
  12 import jalview.ws2.actions.annotation.AnnotationAction;
  13 import jalview.ws2.actions.annotation.AnnotationResult;
  14 import jalview.ws2.actions.api.JobI;
  15 import jalview.ws2.actions.api.TaskEventListener;
  16 import jalview.ws2.actions.api.TaskI;
  17 import jalview.ws2.api.JobStatus;
  18
  19 public class AnnotationServiceGuiHandler
  20     implements TaskEventListener<AnnotationResult>
  21 {
  22   private final AlignFrame alignFrame;
  23
  24   private final AlignmentPanel alignPanel;
  25
  26   private final IProgressIndicator progressIndicator;
  27
  28   private final AnnotationAction action;
  29
  30   public AnnotationServiceGuiHandler(AnnotationAction action, AlignFrame frame)
  31   {
  32     this.alignFrame = frame;
  33     this.alignPanel = frame.alignPanel;
  34     this.progressIndicator = frame;
  35     this.action = action;
  36   }
  37
  38   @Override
  39   public void taskStarted(TaskI<AnnotationResult> source, List<? extends JobI> subJobs)
  40   {
  41     progressIndicator.registerHandler(source.getUid(),
  42         new IProgressIndicatorHandler()
  43         {
  44           @Override
  45           public boolean cancelActivity(long id)
  46           {
  47             source.cancel();
  48             return true;
  49           }
  50
  51           @Override
  52           public boolean canCancel()
  53           {
  54             return true;
  55           }
  56         });
  57   }
  58
  59   @Override
  60   public void taskStatusChanged(TaskI<AnnotationResult> source, JobStatus status)
  61   {
  62     switch (status)
  63     {
  64     case INVALID:
  65     case COMPLETED:
  66     case CANCELLED:
  67     case FAILED:
  68     case SERVER_ERROR:
  69       progressIndicator.removeProgressBar(source.getUid());
  70       break;
  71     case READY:
  72     case SUBMITTED:
  73     case QUEUED:
  74     case RUNNING:
  75     case UNKNOWN:
  76       progressIndicator.addProgressBar(source.getUid(), action.getFullName());
  77       break;
  78     }
  79   }
  80
  81   @Override
  82   public void taskCompleted(TaskI<AnnotationResult> source, final AnnotationResult result)
  83   {
  84     if (result == null)
  85       return;
  86     if (result.getTransferFeatures())
  87     {
  88       alignFrame.getViewport().applyFeaturesStyle(new FeatureSettingsAdapter()
  89       {
  90         @Override
  91         public FeatureColourI getFeatureColour(String type)
  92         {
  93           return result.getFeatureColours().get(type);
  94         }
  95
  96         @Override
  97         public FeatureMatcherSetI getFeatureFilters(String type)
  98         {
  99           return result.getFeatureFilters().get(type);
 100         }
 101
 102         @Override
 103         public boolean isFeatureDisplayed(String type)
 104         {
 105           return result.getFeatureColours().containsKey(type);
 106         }
 107       });
 108       if (alignFrame.alignPanel == alignPanel)
 109       {
 110         alignFrame.getViewport().setShowSequenceFeatures(true);
 111         alignFrame.setMenusForViewport();
 112       }
 113     }
 114     alignPanel.adjustAnnotationHeight();
 115   }
 116
 117   @Override
 118   public void taskException(TaskI<AnnotationResult> source, Exception e)
 119   {
 120
 121   }
 122
 123   @Override
 124   public void subJobStatusChanged(TaskI<AnnotationResult> source, JobI job, JobStatus status)
 125   {
 126
 127   }
 128
 129   @Override
 130   public void subJobLogChanged(TaskI<AnnotationResult> source, JobI job, String log)
 131   {
 132
 133   }
 134
 135   @Override
 136   public void subJobErrorLogChanged(TaskI<AnnotationResult> source, JobI job, String log)
 137   {
 138
 139   }
 140 }