src/jalview/ws2/operations/AnnotationOperation.java

   1 package jalview.ws2.operations;
   2
   3 import java.io.IOException;
   4 import java.util.List;
   5 import java.util.Map;
   6
   7 import jalview.api.FeatureColourI;
   8 import jalview.datamodel.AlignmentAnnotation;
   9 import jalview.datamodel.SequenceI;
  10 import jalview.datamodel.features.FeatureMatcherSetI;
  11 import jalview.ws2.WSJob;
  12 import jalview.ws2.WebServiceI;
  13 import jalview.ws2.gui.AnnotationMenuBuilder;
  14 import jalview.ws2.gui.MenuEntryProviderI;
  15
  16 public class AnnotationOperation extends AbstractOperation
  17 {
  18   @FunctionalInterface
  19   public static interface AnnotationResultSupplier
  20   {
  21     List<AlignmentAnnotation> attachAnnotations(WSJob job,
  22         List<SequenceI> seqs, Map<String, FeatureColourI> featureColours,
  23         Map<String, FeatureMatcherSetI> featureFilters) throws IOException;
  24   }
  25
  26   AnnotationResultSupplier annotationSupplier;
  27
  28   public AnnotationOperation(WebServiceI service, String typeName,
  29       AnnotationResultSupplier annotationSupplier)
  30   {
  31     super(service, typeName);
  32     this.annotationSupplier = annotationSupplier;
  33   }
  34
  35   @Override
  36   public MenuEntryProviderI getMenuBuilder()
  37   {
  38     return new AnnotationMenuBuilder(this);
  39   }
  40
  41 }