src/jalview/xml/binding/jalview/JalviewUserColours.java

   1 //
   2 // This file was generated by the Eclipse Implementation of JAXB, v2.3.3
   3 // See https://eclipse-ee4j.github.io/jaxb-ri
   4 // Any modifications to this file will be lost upon recompilation of the source schema.
   5 // Generated on: 2023.09.01 at 02:16:11 PM BST
   6 //
   7
   8
   9 package jalview.xml.binding.jalview;
  10
  11 import java.util.ArrayList;
  12 import java.util.List;
  13 import javax.xml.bind.annotation.XmlAccessType;
  14 import javax.xml.bind.annotation.XmlAccessorType;
  15 import javax.xml.bind.annotation.XmlAttribute;
  16 import javax.xml.bind.annotation.XmlElement;
  17 import javax.xml.bind.annotation.XmlType;
  18
  19
  20 /**
  21  * &lt;p&gt;Java class for JalviewUserColours complex type.
  22  *
  23  * &lt;p&gt;The following schema fragment specifies the expected content contained within this class.
  24  *
  25  * &lt;pre&gt;
  26  * &amp;lt;complexType name="JalviewUserColours"&amp;gt;
  27  *   &amp;lt;complexContent&amp;gt;
  28  *     &amp;lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&amp;gt;
  29  *       &amp;lt;sequence&amp;gt;
  30  *         &amp;lt;element name="Version" type="{http://www.w3.org/2001/XMLSchema}string" minOccurs="0"/&amp;gt;
  31  *         &amp;lt;element name="colour" maxOccurs="unbounded" minOccurs="0"&amp;gt;
  32  *           &amp;lt;complexType&amp;gt;
  33  *             &amp;lt;complexContent&amp;gt;
  34  *               &amp;lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&amp;gt;
  35  *                 &amp;lt;sequence&amp;gt;
  36  *                   &amp;lt;element name="attributeName" type="{http://www.w3.org/2001/XMLSchema}string" maxOccurs="2" minOccurs="0"/&amp;gt;
  37  *                 &amp;lt;/sequence&amp;gt;
  38  *                 &amp;lt;attribute name="Name" type="{http://www.w3.org/2001/XMLSchema}string" /&amp;gt;
  39  *                 &amp;lt;attribute name="RGB" use="required" type="{http://www.w3.org/2001/XMLSchema}string" /&amp;gt;
  40  *                 &amp;lt;attribute name="minRGB" type="{http://www.w3.org/2001/XMLSchema}string" /&amp;gt;
  41  *                 &amp;lt;attribute name="noValueColour" type="{www.jalview.org/colours}NoValueColour" default="Min" /&amp;gt;
  42  *                 &amp;lt;attribute name="threshType" type="{www.jalview.org/colours}ThresholdType" /&amp;gt;
  43  *                 &amp;lt;attribute name="threshold" type="{http://www.w3.org/2001/XMLSchema}float" /&amp;gt;
  44  *                 &amp;lt;attribute name="max" type="{http://www.w3.org/2001/XMLSchema}float" /&amp;gt;
  45  *                 &amp;lt;attribute name="min" type="{http://www.w3.org/2001/XMLSchema}float" /&amp;gt;
  46  *                 &amp;lt;attribute name="colourByLabel" type="{http://www.w3.org/2001/XMLSchema}boolean" /&amp;gt;
  47  *                 &amp;lt;attribute name="autoScale" type="{http://www.w3.org/2001/XMLSchema}boolean" /&amp;gt;
  48  *               &amp;lt;/restriction&amp;gt;
  49  *             &amp;lt;/complexContent&amp;gt;
  50  *           &amp;lt;/complexType&amp;gt;
  51  *         &amp;lt;/element&amp;gt;
  52  *         &amp;lt;element name="filter" maxOccurs="unbounded" minOccurs="0"&amp;gt;
  53  *           &amp;lt;complexType&amp;gt;
  54  *             &amp;lt;complexContent&amp;gt;
  55  *               &amp;lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&amp;gt;
  56  *                 &amp;lt;sequence&amp;gt;
  57  *                   &amp;lt;element name="matcherSet" type="{www.jalview.org/colours}FeatureMatcherSet"/&amp;gt;
  58  *                 &amp;lt;/sequence&amp;gt;
  59  *                 &amp;lt;attribute name="featureType" use="required" type="{http://www.w3.org/2001/XMLSchema}string" /&amp;gt;
  60  *               &amp;lt;/restriction&amp;gt;
  61  *             &amp;lt;/complexContent&amp;gt;
  62  *           &amp;lt;/complexType&amp;gt;
  63  *         &amp;lt;/element&amp;gt;
  64  *       &amp;lt;/sequence&amp;gt;
  65  *       &amp;lt;attribute name="schemeName" type="{http://www.w3.org/2001/XMLSchema}string" /&amp;gt;
  66  *     &amp;lt;/restriction&amp;gt;
  67  *   &amp;lt;/complexContent&amp;gt;
  68  * &amp;lt;/complexType&amp;gt;
  69  * &lt;/pre&gt;
  70  *
  71  *
  72  */
  73 @XmlAccessorType(XmlAccessType.FIELD)
  74 @XmlType(name = "JalviewUserColours", namespace = "www.jalview.org/colours", propOrder = {
  75     "version",
  76     "colour",
  77     "filter"
  78 })
  79 public class JalviewUserColours {
  80
  81     @XmlElement(name = "Version", namespace = "")
  82     protected String version;
  83     @XmlElement(namespace = "")
  84     protected List<JalviewUserColours.Colour> colour;
  85     @XmlElement(namespace = "")
  86     protected List<JalviewUserColours.Filter> filter;
  87     @XmlAttribute(name = "schemeName")
  88     protected String schemeName;
  89
  90     /**
  91      * Gets the value of the version property.
  92      *
  93      * @return
  94      *     possible object is
  95      *     {@link String }
  96      *
  97      */
  98     public String getVersion() {
  99         return version;
 100     }
 101
 102     /**
 103      * Sets the value of the version property.
 104      *
 105      * @param value
 106      *     allowed object is
 107      *     {@link String }
 108      *
 109      */
 110     public void setVersion(String value) {
 111         this.version = value;
 112     }
 113
 114     /**
 115      * Gets the value of the colour property.
 116      *
 117      * &lt;p&gt;
 118      * This accessor method returns a reference to the live list,
 119      * not a snapshot. Therefore any modification you make to the
 120      * returned list will be present inside the JAXB object.
 121      * This is why there is not a &lt;CODE&gt;set&lt;/CODE&gt; method for the colour property.
 122      *
 123      * &lt;p&gt;
 124      * For example, to add a new item, do as follows:
 125      * &lt;pre&gt;
 126      *    getColour().add(newItem);
 127      * &lt;/pre&gt;
 128      *
 129      *
 130      * &lt;p&gt;
 131      * Objects of the following type(s) are allowed in the list
 132      * {@link JalviewUserColours.Colour }
 133      *
 134      *
 135      */
 136     public List<JalviewUserColours.Colour> getColour() {
 137         if (colour == null) {
 138             colour = new ArrayList<JalviewUserColours.Colour>();
 139         }
 140         return this.colour;
 141     }
 142
 143     /**
 144      * Gets the value of the filter property.
 145      *
 146      * &lt;p&gt;
 147      * This accessor method returns a reference to the live list,
 148      * not a snapshot. Therefore any modification you make to the
 149      * returned list will be present inside the JAXB object.
 150      * This is why there is not a &lt;CODE&gt;set&lt;/CODE&gt; method for the filter property.
 151      *
 152      * &lt;p&gt;
 153      * For example, to add a new item, do as follows:
 154      * &lt;pre&gt;
 155      *    getFilter().add(newItem);
 156      * &lt;/pre&gt;
 157      *
 158      *
 159      * &lt;p&gt;
 160      * Objects of the following type(s) are allowed in the list
 161      * {@link JalviewUserColours.Filter }
 162      *
 163      *
 164      */
 165     public List<JalviewUserColours.Filter> getFilter() {
 166         if (filter == null) {
 167             filter = new ArrayList<JalviewUserColours.Filter>();
 168         }
 169         return this.filter;
 170     }
 171
 172     /**
 173      * Gets the value of the schemeName property.
 174      *
 175      * @return
 176      *     possible object is
 177      *     {@link String }
 178      *
 179      */
 180     public String getSchemeName() {
 181         return schemeName;
 182     }
 183
 184     /**
 185      * Sets the value of the schemeName property.
 186      *
 187      * @param value
 188      *     allowed object is
 189      *     {@link String }
 190      *
 191      */
 192     public void setSchemeName(String value) {
 193         this.schemeName = value;
 194     }
 195
 196
 197     /**
 198      * &lt;p&gt;Java class for anonymous complex type.
 199      *
 200      * &lt;p&gt;The following schema fragment specifies the expected content contained within this class.
 201      *
 202      * &lt;pre&gt;
 203      * &amp;lt;complexType&amp;gt;
 204      *   &amp;lt;complexContent&amp;gt;
 205      *     &amp;lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&amp;gt;
 206      *       &amp;lt;sequence&amp;gt;
 207      *         &amp;lt;element name="attributeName" type="{http://www.w3.org/2001/XMLSchema}string" maxOccurs="2" minOccurs="0"/&amp;gt;
 208      *       &amp;lt;/sequence&amp;gt;
 209      *       &amp;lt;attribute name="Name" type="{http://www.w3.org/2001/XMLSchema}string" /&amp;gt;
 210      *       &amp;lt;attribute name="RGB" use="required" type="{http://www.w3.org/2001/XMLSchema}string" /&amp;gt;
 211      *       &amp;lt;attribute name="minRGB" type="{http://www.w3.org/2001/XMLSchema}string" /&amp;gt;
 212      *       &amp;lt;attribute name="noValueColour" type="{www.jalview.org/colours}NoValueColour" default="Min" /&amp;gt;
 213      *       &amp;lt;attribute name="threshType" type="{www.jalview.org/colours}ThresholdType" /&amp;gt;
 214      *       &amp;lt;attribute name="threshold" type="{http://www.w3.org/2001/XMLSchema}float" /&amp;gt;
 215      *       &amp;lt;attribute name="max" type="{http://www.w3.org/2001/XMLSchema}float" /&amp;gt;
 216      *       &amp;lt;attribute name="min" type="{http://www.w3.org/2001/XMLSchema}float" /&amp;gt;
 217      *       &amp;lt;attribute name="colourByLabel" type="{http://www.w3.org/2001/XMLSchema}boolean" /&amp;gt;
 218      *       &amp;lt;attribute name="autoScale" type="{http://www.w3.org/2001/XMLSchema}boolean" /&amp;gt;
 219      *     &amp;lt;/restriction&amp;gt;
 220      *   &amp;lt;/complexContent&amp;gt;
 221      * &amp;lt;/complexType&amp;gt;
 222      * &lt;/pre&gt;
 223      *
 224      *
 225      */
 226     @XmlAccessorType(XmlAccessType.FIELD)
 227     @XmlType(name = "", propOrder = {
 228         "attributeName"
 229     })
 230     public static class Colour {
 231
 232         @XmlElement(namespace = "")
 233         protected List<String> attributeName;
 234         @XmlAttribute(name = "Name")
 235         protected String name;
 236         @XmlAttribute(name = "RGB", required = true)
 237         protected String rgb;
 238         @XmlAttribute(name = "minRGB")
 239         protected String minRGB;
 240         @XmlAttribute(name = "noValueColour")
 241         protected NoValueColour noValueColour;
 242         @XmlAttribute(name = "threshType")
 243         protected ThresholdType threshType;
 244         @XmlAttribute(name = "threshold")
 245         protected Float threshold;
 246         @XmlAttribute(name = "max")
 247         protected Float max;
 248         @XmlAttribute(name = "min")
 249         protected Float min;
 250         @XmlAttribute(name = "colourByLabel")
 251         protected Boolean colourByLabel;
 252         @XmlAttribute(name = "autoScale")
 253         protected Boolean autoScale;
 254
 255         /**
 256          * Gets the value of the attributeName property.
 257          *
 258          * &lt;p&gt;
 259          * This accessor method returns a reference to the live list,
 260          * not a snapshot. Therefore any modification you make to the
 261          * returned list will be present inside the JAXB object.
 262          * This is why there is not a &lt;CODE&gt;set&lt;/CODE&gt; method for the attributeName property.
 263          *
 264          * &lt;p&gt;
 265          * For example, to add a new item, do as follows:
 266          * &lt;pre&gt;
 267          *    getAttributeName().add(newItem);
 268          * &lt;/pre&gt;
 269          *
 270          *
 271          * &lt;p&gt;
 272          * Objects of the following type(s) are allowed in the list
 273          * {@link String }
 274          *
 275          *
 276          */
 277         public List<String> getAttributeName() {
 278             if (attributeName == null) {
 279                 attributeName = new ArrayList<String>();
 280             }
 281             return this.attributeName;
 282         }
 283
 284         /**
 285          * Gets the value of the name property.
 286          *
 287          * @return
 288          *     possible object is
 289          *     {@link String }
 290          *
 291          */
 292         public String getName() {
 293             return name;
 294         }
 295
 296         /**
 297          * Sets the value of the name property.
 298          *
 299          * @param value
 300          *     allowed object is
 301          *     {@link String }
 302          *
 303          */
 304         public void setName(String value) {
 305             this.name = value;
 306         }
 307
 308         /**
 309          * Gets the value of the rgb property.
 310          *
 311          * @return
 312          *     possible object is
 313          *     {@link String }
 314          *
 315          */
 316         public String getRGB() {
 317             return rgb;
 318         }
 319
 320         /**
 321          * Sets the value of the rgb property.
 322          *
 323          * @param value
 324          *     allowed object is
 325          *     {@link String }
 326          *
 327          */
 328         public void setRGB(String value) {
 329             this.rgb = value;
 330         }
 331
 332         /**
 333          * Gets the value of the minRGB property.
 334          *
 335          * @return
 336          *     possible object is
 337          *     {@link String }
 338          *
 339          */
 340         public String getMinRGB() {
 341             return minRGB;
 342         }
 343
 344         /**
 345          * Sets the value of the minRGB property.
 346          *
 347          * @param value
 348          *     allowed object is
 349          *     {@link String }
 350          *
 351          */
 352         public void setMinRGB(String value) {
 353             this.minRGB = value;
 354         }
 355
 356         /**
 357          * Gets the value of the noValueColour property.
 358          *
 359          * @return
 360          *     possible object is
 361          *     {@link NoValueColour }
 362          *
 363          */
 364         public NoValueColour getNoValueColour() {
 365             if (noValueColour == null) {
 366                 return NoValueColour.MIN;
 367             } else {
 368                 return noValueColour;
 369             }
 370         }
 371
 372         /**
 373          * Sets the value of the noValueColour property.
 374          *
 375          * @param value
 376          *     allowed object is
 377          *     {@link NoValueColour }
 378          *
 379          */
 380         public void setNoValueColour(NoValueColour value) {
 381             this.noValueColour = value;
 382         }
 383
 384         /**
 385          * Gets the value of the threshType property.
 386          *
 387          * @return
 388          *     possible object is
 389          *     {@link ThresholdType }
 390          *
 391          */
 392         public ThresholdType getThreshType() {
 393             return threshType;
 394         }
 395
 396         /**
 397          * Sets the value of the threshType property.
 398          *
 399          * @param value
 400          *     allowed object is
 401          *     {@link ThresholdType }
 402          *
 403          */
 404         public void setThreshType(ThresholdType value) {
 405             this.threshType = value;
 406         }
 407
 408         /**
 409          * Gets the value of the threshold property.
 410          *
 411          * @return
 412          *     possible object is
 413          *     {@link Float }
 414          *
 415          */
 416         public Float getThreshold() {
 417             return threshold;
 418         }
 419
 420         /**
 421          * Sets the value of the threshold property.
 422          *
 423          * @param value
 424          *     allowed object is
 425          *     {@link Float }
 426          *
 427          */
 428         public void setThreshold(Float value) {
 429             this.threshold = value;
 430         }
 431
 432         /**
 433          * Gets the value of the max property.
 434          *
 435          * @return
 436          *     possible object is
 437          *     {@link Float }
 438          *
 439          */
 440         public Float getMax() {
 441             return max;
 442         }
 443
 444         /**
 445          * Sets the value of the max property.
 446          *
 447          * @param value
 448          *     allowed object is
 449          *     {@link Float }
 450          *
 451          */
 452         public void setMax(Float value) {
 453             this.max = value;
 454         }
 455
 456         /**
 457          * Gets the value of the min property.
 458          *
 459          * @return
 460          *     possible object is
 461          *     {@link Float }
 462          *
 463          */
 464         public Float getMin() {
 465             return min;
 466         }
 467
 468         /**
 469          * Sets the value of the min property.
 470          *
 471          * @param value
 472          *     allowed object is
 473          *     {@link Float }
 474          *
 475          */
 476         public void setMin(Float value) {
 477             this.min = value;
 478         }
 479
 480         /**
 481          * Gets the value of the colourByLabel property.
 482          *
 483          * @return
 484          *     possible object is
 485          *     {@link Boolean }
 486          *
 487          */
 488         public Boolean isColourByLabel() {
 489             return colourByLabel;
 490         }
 491
 492         /**
 493          * Sets the value of the colourByLabel property.
 494          *
 495          * @param value
 496          *     allowed object is
 497          *     {@link Boolean }
 498          *
 499          */
 500         public void setColourByLabel(Boolean value) {
 501             this.colourByLabel = value;
 502         }
 503
 504         /**
 505          * Gets the value of the autoScale property.
 506          *
 507          * @return
 508          *     possible object is
 509          *     {@link Boolean }
 510          *
 511          */
 512         public Boolean isAutoScale() {
 513             return autoScale;
 514         }
 515
 516         /**
 517          * Sets the value of the autoScale property.
 518          *
 519          * @param value
 520          *     allowed object is
 521          *     {@link Boolean }
 522          *
 523          */
 524         public void setAutoScale(Boolean value) {
 525             this.autoScale = value;
 526         }
 527
 528     }
 529
 530
 531     /**
 532      * &lt;p&gt;Java class for anonymous complex type.
 533      *
 534      * &lt;p&gt;The following schema fragment specifies the expected content contained within this class.
 535      *
 536      * &lt;pre&gt;
 537      * &amp;lt;complexType&amp;gt;
 538      *   &amp;lt;complexContent&amp;gt;
 539      *     &amp;lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&amp;gt;
 540      *       &amp;lt;sequence&amp;gt;
 541      *         &amp;lt;element name="matcherSet" type="{www.jalview.org/colours}FeatureMatcherSet"/&amp;gt;
 542      *       &amp;lt;/sequence&amp;gt;
 543      *       &amp;lt;attribute name="featureType" use="required" type="{http://www.w3.org/2001/XMLSchema}string" /&amp;gt;
 544      *     &amp;lt;/restriction&amp;gt;
 545      *   &amp;lt;/complexContent&amp;gt;
 546      * &amp;lt;/complexType&amp;gt;
 547      * &lt;/pre&gt;
 548      *
 549      *
 550      */
 551     @XmlAccessorType(XmlAccessType.FIELD)
 552     @XmlType(name = "", propOrder = {
 553         "matcherSet"
 554     })
 555     public static class Filter {
 556
 557         @XmlElement(namespace = "", required = true)
 558         protected FeatureMatcherSet matcherSet;
 559         @XmlAttribute(name = "featureType", required = true)
 560         protected String featureType;
 561
 562         /**
 563          * Gets the value of the matcherSet property.
 564          *
 565          * @return
 566          *     possible object is
 567          *     {@link FeatureMatcherSet }
 568          *
 569          */
 570         public FeatureMatcherSet getMatcherSet() {
 571             return matcherSet;
 572         }
 573
 574         /**
 575          * Sets the value of the matcherSet property.
 576          *
 577          * @param value
 578          *     allowed object is
 579          *     {@link FeatureMatcherSet }
 580          *
 581          */
 582         public void setMatcherSet(FeatureMatcherSet value) {
 583             this.matcherSet = value;
 584         }
 585
 586         /**
 587          * Gets the value of the featureType property.
 588          *
 589          * @return
 590          *     possible object is
 591          *     {@link String }
 592          *
 593          */
 594         public String getFeatureType() {
 595             return featureType;
 596         }
 597
 598         /**
 599          * Sets the value of the featureType property.
 600          *
 601          * @param value
 602          *     allowed object is
 603          *     {@link String }
 604          *
 605          */
 606         public void setFeatureType(String value) {
 607             this.featureType = value;
 608         }
 609
 610     }
 611
 612 }