2 * Jalview - A Sequence Alignment Editor and Viewer (Version 2.4)
3 * Copyright (C) 2008 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
5 * This program is free software; you can redistribute it and/or
6 * modify it under the terms of the GNU General Public License
7 * as published by the Free Software Foundation; either version 2
8 * of the License, or (at your option) any later version.
10 * This program is distributed in the hope that it will be useful,
11 * but WITHOUT ANY WARRANTY; without even the implied warranty of
12 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
13 * GNU General Public License for more details.
15 * You should have received a copy of the GNU General Public License
16 * along with this program; if not, write to the Free Software
17 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
20 * Jalview - A Sequence Alignment Editor and Viewer
21 * Copyright (C) 2007 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
23 * This program is free software; you can redistribute it and/or
24 * modify it under the terms of the GNU General Public License
25 * as published by the Free Software Foundation; either version 2
26 * of the License, or (at your option) any later version.
28 * This program is distributed in the hope that it will be useful,
29 * but WITHOUT ANY WARRANTY; without even the implied warranty of
30 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
31 * GNU General Public License for more details.
33 * You should have received a copy of the GNU General Public License
34 * along with this program; if not, write to the Free Software
35 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
37 package vamsas.objects.simple;
39 public class MsaResult extends vamsas.objects.simple.Result implements
42 private vamsas.objects.simple.Alignment msa;
44 private java.lang.Object __equalsCalc = null;
46 private boolean __hashCodeCalc = false;
52 public MsaResult(vamsas.objects.simple.Alignment msa)
58 * Gets the msa value for this MsaResult.
62 public vamsas.objects.simple.Alignment getMsa()
68 * Sets the msa value for this MsaResult.
72 public void setMsa(vamsas.objects.simple.Alignment msa)
77 public synchronized boolean equals(java.lang.Object obj)
79 if (!(obj instanceof MsaResult))
84 MsaResult other = (MsaResult) obj;
96 if (__equalsCalc != null)
98 return (__equalsCalc == obj);
104 _equals = super.equals(obj)
105 && (((this.msa == null) && (other.getMsa() == null)) || ((this.msa != null) && this.msa
106 .equals(other.getMsa())));
112 public synchronized int hashCode()
119 __hashCodeCalc = true;
121 int _hashCode = super.hashCode();
123 if (getMsa() != null)
125 _hashCode += getMsa().hashCode();
128 __hashCodeCalc = false;