2 VARNA is a tool for the automated drawing, visualization and annotation of the secondary structure of RNA, designed as a companion software for web servers and databases.
3 Copyright (C) 2008 Kevin Darty, Alain Denise and Yann Ponty.
4 electronic mail : Yann.Ponty@lri.fr
5 paper mail : LRI, bat 490 Université Paris-Sud 91405 Orsay Cedex France
7 This file is part of VARNA version 3.1.
8 VARNA version 3.1 is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
9 as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
11 VARNA version 3.1 is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY;
12 without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
13 See the GNU General Public License for more details.
15 You should have received a copy of the GNU General Public License along with VARNA version 3.1.
16 If not, see http://www.gnu.org/licenses.
18 package fr.orsay.lri.varna.controlers;
20 import java.awt.event.ActionEvent;
21 import java.awt.event.ActionListener;
23 import javax.swing.Timer;
25 import fr.orsay.lri.varna.VARNAPanel;
28 * BH SwingJS converted to Timer mechanism for compatibility with JavaScript
31 public class ControleurBlinkingThread extends Thread implements ActionListener {
32 public static final long DEFAULT_FREQUENCY = 50;
34 private VARNAPanel _parent;
35 private double _minVal, _maxVal, _val, _incr;
36 private boolean _increasing = true;
37 private boolean _active = false;
39 public ControleurBlinkingThread(VARNAPanel vp) {
40 this(vp, DEFAULT_FREQUENCY, 0, 1.0, 0.0, 0.2);
43 public ControleurBlinkingThread(VARNAPanel vp, long period, double minVal,
44 double maxVal, double val, double incr) {
52 public void setActive(boolean b) {
64 public boolean getActive() {
69 public double getVal() {
73 protected final int START = 0;
74 protected final int LOOP = 1;
75 protected final int STOP = -1;
77 protected int nextMode = START;
81 public void interrupt() {
88 public void actionPerformed(ActionEvent e) {
98 // _val = Math.min(_val + _incr, _maxVal);
99 // if (_val == _maxVal) {
100 // _increasing = false;
103 // _val = Math.max(_val - _incr, _minVal);
104 // if (_val == _minVal) {
105 // _increasing = true;
108 // _parent.repaint();
112 // } catch (InterruptedException e) {
133 _val = Math.min(_val + _incr, _maxVal);
134 if (_val == _maxVal) {
138 _val = Math.max(_val - _incr, _minVal);
139 if (_val == _minVal) {
148 } catch (InterruptedException e) {
155 private void startTimer(long delay) {
157 timer = new Timer((int) delay, this);
158 timer.setRepeats(false);
162 private void stopTimer() {