2 VARNA is a tool for the automated drawing, visualization and annotation of the secondary structure of RNA, designed as a companion software for web servers and databases.
3 Copyright (C) 2008 Kevin Darty, Alain Denise and Yann Ponty.
4 electronic mail : Yann.Ponty@lri.fr
5 paper mail : LRI, bat 490 Université Paris-Sud 91405 Orsay Cedex France
7 This file is part of VARNA version 3.1.
8 VARNA version 3.1 is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
9 as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
11 VARNA version 3.1 is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY;
12 without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
13 See the GNU General Public License for more details.
15 You should have received a copy of the GNU General Public License along with VARNA version 3.1.
16 If not, see http://www.gnu.org/licenses.
18 package fr.orsay.lri.varna.exceptions;
20 public class MappingException extends Exception {
21 private static final long serialVersionUID = 1L;
23 public static final int MULTIPLE_PARTNERS_DEFINITION_ATTEMPT = 1;
24 public static final int BAD_ALIGNMENT_INPUT = 2;
25 public static final int CUSTOM_MESSAGE = 3;
27 private String _errorMessage;
30 public MappingException(String errorMessage) {
31 _errorMessage = errorMessage;
32 _type = CUSTOM_MESSAGE;
35 public MappingException(int type) {
39 public String getMessage() {
41 case MULTIPLE_PARTNERS_DEFINITION_ATTEMPT:
42 return "Mapping error: Attempt to define multiple partners for a base-pair";
43 case BAD_ALIGNMENT_INPUT:
44 return "Mapping error: Bad input alignment";
49 return "Mapping error: Type is unknown.";