1 package jalview.datamodel;
2 import static org.testng.AssertJUnit.assertEquals;
3 import static org.testng.AssertJUnit.assertFalse;
4 import static org.testng.AssertJUnit.assertTrue;
6 import jalview.datamodel.SearchResults.Match;
8 import org.testng.annotations.Test;
10 public class MatchTest
13 @Test(groups = { "Functional" })
14 public void testToString()
16 SequenceI seq = new Sequence("", "abcdefghijklm");
17 Match m = new SearchResults().new Match(seq, 3, 5);
18 assertEquals("2cde", m.toString());
21 @Test(groups = { "Functional" })
22 public void testEquals()
24 SequenceI seq1 = new Sequence("", "abcdefghijklm");
25 SequenceI seq2 = new Sequence("", "abcdefghijklm");
26 SearchResults sr1 = new SearchResults();
27 SearchResults sr2 = new SearchResults();
29 assertFalse(sr1.equals(null));
30 assertFalse(sr1.equals(seq1));
31 assertTrue(sr1.equals(sr1));
32 assertTrue(sr1.equals(sr2));
33 assertTrue(sr2.equals(sr1));
35 sr1.addResult(seq1, 1, 1);
36 assertFalse(sr1.equals(sr2));
37 assertFalse(sr2.equals(sr1));
39 sr2.addResult(seq1, 1, 1);
40 assertTrue(sr1.equals(sr2));
41 assertTrue(sr2.equals(sr1));
44 * same match but on different sequences - not equal
46 SearchResults sr3 = new SearchResults();
47 sr3.addResult(seq2, 1, 1);
48 assertFalse(sr1.equals(sr3));
49 assertFalse(sr3.equals(sr1));
52 * same sequence but different end position - not equal
54 sr1.addResult(seq1, 3, 4);
55 sr2.addResult(seq1, 3, 5);
56 assertFalse(sr1.equals(sr2));
59 * same sequence but different start position - not equal
61 sr1 = new SearchResults();
62 sr2 = new SearchResults();
63 sr1.addResult(seq1, 3, 4);
64 sr2.addResult(seq1, 2, 4);
65 assertFalse(sr1.equals(sr2));