test/jalview/ext/archaeopteryx/AptxJalviewTreeTest.java

   1 package jalview.ext.archaeopteryx;
   2
   3 import jalview.analysis.TreeBuilder;
   4 import jalview.bin.Jalview;
   5
   6 import org.forester.archaeopteryx.MainFrame;
   7 import org.forester.archaeopteryx.TreePanel;
   8 import org.forester.phylogeny.Phylogeny;
   9 import org.testng.annotations.BeforeClass;
  10
  11 public class AptxJalviewTreeTest
  12 {
  13   TreeBuilder jalviewTree;
  14
  15   TreePanel treePanel;
  16
  17   Phylogeny tree;
  18
  19   MainFrame aptx;
  20
  21   Jalview jalview;
  22
  23   @BeforeClass(alwaysRun = true)
  24   public void setUpTree()
  25   {
  26
  27   }
  28
  29   @BeforeClass(dependsOnMethods = { "setUpTree" })
  30   public void setUpJalview()
  31   {
  32     String[] args = new String[0];
  33     Jalview.main(args);
  34     aptx = ArchaeopteryxInit.createInstance(jalviewTree);
  35
  36     treePanel = aptx.getMainPanel().getCurrentTreePanel();
  37     tree = treePanel.getPhylogeny();
  38   }
  39 }