JAL-1778 reinstated this.ssm to handle 'close all windows' robustly
[jalview.git] / test / jalview / testProps.jvprops
1 #---JalviewX Properties File---
2 #Fri Apr 25 09:54:25 BST 2014
3 SCREEN_Y=768
4 SCREEN_X=936
5 SHOW_WSDISCOVERY_ERRORS=true
6 LATEST_VERSION=2.8.0b1
7 SHOW_CONSERVATION=true
8 JALVIEW_RSS_WINDOW_SCREEN_WIDTH=550
9 JAVA_CONSOLE_SCREEN_WIDTH=450
10 LAST_DIRECTORY=/Volumes/Data/Users/jimp/Documents/testing/Jalview/examples
11 ID_ITALICS=true
12 SORT_ALIGNMENT=No sort
13 SHOW_IDENTITY=true
14 WSMENU_BYHOST=false
15 SEQUENCE_LINKS=EMBL-EBI Search|http\://www.ebi.ac.uk/ebisearch/search.ebi?db\=allebi&query\=$SEQUENCE_ID$
16 SHOW_FULLSCREEN=false
17 RECENT_URL=http\://www.jalview.org/examples/exampleFile_2_7.jar
18 FONT_NAME=SansSerif
19 BLC_JVSUFFIX=true
20 VERSION_CHECK=false
21 YEAR=2011
22 SHOW_DBREFS_TOOLTIP=true
23 MSF_JVSUFFIX=true
24 SCREENGEOMETRY_HEIGHT=1600
25 JAVA_CONSOLE_SCREEN_Y=475
26 JAVA_CONSOLE_SCREEN_X=830
27 PFAM_JVSUFFIX=true
28 PIR_JVSUFFIX=true
29 STARTUP_FILE=http\://www.jalview.org/examples/exampleFile_2_3.jar
30 JAVA_CONSOLE_SCREEN_HEIGHT=162
31 PIR_MODELLER=false
32 GAP_SYMBOL=-
33 SHOW_QUALITY=true
34 SHOW_GROUP_CONSERVATION=false
35 SHOW_JWS2_SERVICES=true
36 SHOW_NPFEATS_TOOLTIP=true
37 FONT_STYLE=plain
38 ANTI_ALIAS=false
39 SORT_BY_TREE=false
40 RSBS_SERVICES=|Multi-Harmony|Analysis|Sequence Harmony and Multi-Relief (Brandt et al. 2010)|hseparable,gapCharacter\='-',returns\='ANNOTATION'|?tool\=jalview|http\://zeus.few.vu.nl/programs/shmrwww/index.php?tool\=jalview&groups\=$PARTITION\:min\='2',minsize\='2',sep\=' '$&ali_file\=$ALIGNMENT\:format\='FASTA',writeasfile$
41 AUTHORFNAMES=Jim Procter, Andrew Waterhouse, Jan Engelhardt, Lauren Lui, Michele Clamp, James Cuff, Steve Searle, David Martin & Geoff Barton
42 JALVIEW_RSS_WINDOW_SCREEN_HEIGHT=328
43 SHOW_GROUP_CONSENSUS=false
44 SHOW_CONSENSUS_HISTOGRAM=true
45 SHOW_OVERVIEW=false
46 AUTHORS=J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle
47 FIGURE_AUTOIDWIDTH=false
48 SCREEN_WIDTH=900
49 ANNOTATIONCOLOUR_MIN=ffc800
50 SHOW_STARTUP_FILE=false
51 RECENT_FILE=examples/uniref50.fa\t/Volumes/Data/Users/jimp/Documents/testing/Jalview/examples/RF00031_folded.stk\t/Volumes/Data/Users/jimp/bs_ig_mult.out
52 DEFAULT_FILE_FORMAT=FASTA
53 SHOW_JAVA_CONSOLE=false
54 VERSION=2.8b1
55 FIGURE_USERIDWIDTH=
56 WSMENU_BYTYPE=false
57 DEFAULT_COLOUR=None
58 NOQUESTIONNAIRES=true
59 JALVIEW_NEWS_RSS_LASTMODIFIED=Apr 23, 2014 2\:53\:26 PM
60 BUILD_DATE=01 November 2013
61 PILEUP_JVSUFFIX=true
62 SHOW_CONSENSUS_LOGO=false
63 SCREENGEOMETRY_WIDTH=2560
64 SHOW_ANNOTATIONS=true
65 JALVIEW_RSS_WINDOW_SCREEN_Y=0
66 USAGESTATS=false
67 JALVIEW_RSS_WINDOW_SCREEN_X=0
68 SHOW_UNCONSERVED=false
69 SHOW_JVSUFFIX=true
70 DAS_LOCAL_SOURCE=
71 SCREEN_HEIGHT=650
72 ANNOTATIONCOLOUR_MAX=ff0000
73 AUTO_CALC_CONSENSUS=true
74 FASTA_JVSUFFIX=true
75 DAS_ACTIVE_SOURCE=uniprot\t
76 JWS2HOSTURLS=http\://www.compbio.dundee.ac.uk/jabaws
77 PAD_GAPS=false
78 CLUSTAL_JVSUFFIX=true
79 SHOW_ENFIN_SERVICES=true
80 FONT_SIZE=10
81 RIGHT_ALIGN_IDS=false
82 USE_PROXY=false
83 WRAP_ALIGNMENT=false
84 #DAS_REGISTRY_URL=http\://www.dasregistry.org/das/ # retired 01/05/2015
85 DAS_REGISTRY_URL=http\://www.ebi.ac.uk/das-srv/registry/das/