test/jalview/util/comparisonTestProps.jvprops

   1 NUCLEOTIDE_AMBIGUITY_DETECTION=true
   2 NUCLEOTIDE_COUNT_PERCENT=55
   3 NUCLEOTIDE_COUNT_LONG_SEQUENCE_AMBIGUITY_PERCENT=95
   4 NUCLEOTIDE_COUNT_SHORT=100
   5 NUCLEOTIDE_COUNT_VERY_SHORT=4