JAL-2324 fix and tests for comparison of Float.NaN scores
[jalview.git] / utils / checkstyle / import-control.xml
1 <?xml version="1.0" encoding="UTF-8"?>
2
3 <!DOCTYPE import-control PUBLIC
4     "-//Puppy Crawl//DTD Import Control 1.1//EN"
5     "http://www.puppycrawl.com/dtds/import_control_1_1.dtd">
6     
7     <!--
8         see http://checkstyle.sourceforge.net/config_imports.html#ImportControl
9         allow/disallow rules propagate to sub-packages 
10         unless local-only="true" is specified
11         
12         note this can handle only one top-level package, so ImportControl is
13         suppressed for MCview and vamsas in checkstyle-suppress.xml
14         (all rules are suppressed for com/ext/org/uk)
15     -->
16    <import-control pkg="jalview">
17    
18                 <allow pkg="java"/>
19                 <allow pkg="jalview"/>
20                 <allow pkg="com.stevesoft.pat"/>
21                 
22                 <subpackage name="appletgui">
23                 <disallow pkg="javax.swing"/>
24                 <disallow pkg="jalview.gui"/>
25                 <disallow pkg="jalview.ws"/>
26                 <allow pkg="org.jmol"/>
27                 <allow pkg="javajs.awt" class="jalview.appletgui.AppletJmolBinding"/>
28             </subpackage>
29                 
30                 <subpackage name="bin">
31                 <allow pkg="groovy"/>
32                 <allow pkg="org.apache.log4j" class="jalview.bin.Cache"/>
33                 <allow pkg="javax.swing" class="jalview.bin.Jalview"/>
34                 <allow pkg="netscape.javascript" class="jalview.bin.JalviewLite"/>
35             </subpackage>
36                 
37                 <subpackage name="datamodel">
38                 <disallow pkg="jalview.gui"/>
39                 <allow pkg="fr.orsay.lri.varna"/>
40                         <subpackage name="xdb">
41                                 <subpackage name="embl">
42                                 <allow pkg="org.exolab.castor"/>
43                             </subpackage>
44                     </subpackage>
45             </subpackage>
46                 
47                 <subpackage name="fts">
48                 <allow pkg="javax.swing"/>
49                 <allow pkg="javax.ws"/>
50                 <allow pkg="org.json"/>
51                 <allow pkg="com.sun.jersey"/>
52             </subpackage>
53                 
54                 <subpackage name="gui">
55                 <allow pkg="javax.swing"/>
56                 <allow pkg="javax.help"/>
57                 <allow pkg="javax.imageio"/>
58                 <allow pkg="ext.edu.ucsf"/>
59                 <allow pkg="net.miginfocom"/>
60                 <allow pkg="org.jibble"/>
61                 <allow pkg="org.jmol"/>
62                 <allow pkg="org.openscience"/>
63                 <allow pkg="org.exolab.castor" class="jalview.gui.Jalview2XML"/>
64                 <allow pkg="org.robsite" class="jalview.gui.BlogReader"/>
65                 <allow pkg="org.apache.log4j" class="jalview.gui.Console"/>
66                 <allow pkg="org.apache.log4j" class="jalview.gui.JalviewAppender"/>
67                 <allow pkg="org.biodas" class="jalview.gui.DasSourceBrowser"/>
68                 <allow pkg="compbio.metadata" class="jalview.gui.WsJobParameters"/>
69                 <allow pkg="fr.orsay.lri.varna" class="jalview.gui.AppVarna"/>
70                 <allow pkg="fr.orsay.lri.varna" class="jalview.gui.AppVarnaBinding"/>
71                 <allow pkg="uk.ac.vamsas" class="jalview.gui.VamsasApplication"/>
72             </subpackage>
73                 
74                 <subpackage name="jbgui">
75                 <allow pkg="javax.swing"/>
76                 <allow pkg="net.miginfocom"/>
77             </subpackage>
78
79                 <subpackage name="httpserver">
80                 <allow pkg="javax.servlet"/>
81                 <allow pkg="org.eclipse.jetty"/>
82             </subpackage>
83
84                 <subpackage name="io">
85                 <allow pkg="javax.swing"/>
86                 <allow pkg="org.jfree"/>
87                 <allow pkg="org.json"/>
88                 <allow pkg="org.jsoup"/>
89                 <allow pkg="uk.ac.ebi"/>
90                 <allow pkg="uk.ac.vamsas"/>
91                 <allow pkg="fr.orsay.lri.varna"/>
92                 <allow pkg="MCview"/>
93                 </subpackage>       
94                                 
95                 <subpackage name="javascript">
96                 <allow pkg="netscape.javascript"/>
97             </subpackage>
98
99                 <subpackage name="rest">
100                 <allow pkg="javax.servlet"/>
101                 </subpackage>
102
103                 <subpackage name="structure">
104                 <allow pkg="MCview"/>
105                 </subpackage>
106
107                 <subpackage name="util">
108                 <allow pkg="javax.swing"/>
109                 <allow pkg="javax.imageio"/>
110                 <allow pkg="org.jfree"/>
111                 <allow pkg="org.jibble"/>
112                 </subpackage>
113
114                 <subpackage name="ws">
115                 <allow pkg="javax.swing"/>
116                 <allow pkg="javax.xml"/>
117                 <allow pkg="ext.vamsas"/>
118                 <allow pkg="compbio"/>
119                 <allow pkg="MCview"/>
120                 <allow pkg="org.apache.http"/>
121                 <allow pkg="org.apache.james"/>
122                 <allow pkg="org.apache.axis"/>
123                 <allow pkg="org.biodas.jdas"/>
124                 <allow pkg="org.exolab.castor"/>
125                 <allow pkg="uk.ac.ebi"/>
126                 <allow pkg="vamsas.objects"/>
127                 </subpackage>
128
129    </import-control>