2 * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.0b1)
3 * Copyright (C) 2014 The Jalview Authors
5 * This file is part of Jalview.
7 * Jalview is free software: you can redistribute it and/or
8 * modify it under the terms of the GNU General Public License
9 * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
11 * Jalview is distributed in the hope that it will be useful, but
12 * WITHOUT ANY WARRANTY; without even the implied warranty
13 * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
14 * PURPOSE. See the GNU General Public License for more details.
16 * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
17 * The Jalview Authors are detailed in the 'AUTHORS' file.
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35 This page generated: <strong>June 8 2004</strong></td></tr></tbody></table><table border="0" width="100%" cellspacing="0" cellpadding="5"><tr><td><div class="navheader"><table width="100%" summary="Navigation header"><tr><th colspan="3" align="center">Appendix A. Library Dependencies</th></tr><tr><td width="20%" align="left"><a accesskey="p" href="plugin-netbeans-license.html">Prev</a> </td><th width="60%" align="center"> </th><td width="20%" align="right"> <a accesskey="n" href="license-bsd.html">Next</a></td></tr></table><hr></div><div class="appendix" lang="en"><div class="titlepage"><div><div><h2 class="title"><a name="dependencies"></a>Appendix A. Library Dependencies</h2></div></div><div></div></div><p>
36 Depending on the distribution, Jalopy depends on some or all of the following
37 freely available libraries:
38 </p><div class="table"><a name="tab-library-dependencies"></a><p class="title"><b>Table A.1. Library dependencies</b></p><table summary="Library dependencies" border="0" style="border-collapse: collapse;"><colgroup><col><col></colgroup><tbody><tr><td style="">Name:</td><td style="">AElfred XML Parser 1.2</td></tr><tr><td style="">Author:</td><td style="">David Brownell, Michael H. Kay, Microstar Software Ltd.</td></tr><tr><td style="">License:</td><td style=""><a href="license-gnu.html" title="Appendix E. GNU GENERAL PUBLIC LICENSE Version 2, June 1991">GNU General Public License</a></td></tr><tr><td style="">Info:</td><td style="">The parser is taken from the Saxon 6.5.2 release.</td></tr><tr><td style="">URL:</td><td style=""><a href="http://sf.net/projects/saxon/" target="_top">http://sf.net/projects/saxon/</a></td></tr><tr><td style=""> </td><td style=""> </td></tr><tr><td style="">Name:</td><td style="">ANTLR Parser Generator 2.7.2a2</td></tr><tr><td style="">Author:</td><td style="">jGuru.com (MageLang Institute), project lead by Terence Parr</td></tr><tr><td style="">License:</td><td style=""><a href="license-antlr.html" title="Appendix C. ANTLR SOFTWARE RIGHTS">Custom, Public Domain</a></td></tr><tr><td style="" valign="top">Info:</td><td style="">Contains some changes and fixes to make it work with Jalopy, re-packaged
39 to avoid classpath clashes.
40 </td></tr><tr><td style="">URL:</td><td style=""><a href="http://www.antlr.org/" target="_top">http://www.antlr.org/</a></td></tr><tr><td style=""> </td><td style=""> </td></tr><tr><td style="">Name:</td><td style="">GNU getopt Java port 1.0.9</td></tr><tr><td style="">Author:</td><td style="">Aaron M. Renn</td></tr><tr><td style="">License:</td><td style=""><a href="license-gnu.html" title="Appendix E. GNU GENERAL PUBLIC LICENSE Version 2, June 1991">GNU General Public License</a></td></tr><tr><td style="">URL:</td><td style=""><a href="http://www.urbanophile.com/~arenn/hacking/download.html" target="_top">http://www.urbanophile.com/~arenn/hacking/download.html</a></td></tr><tr><td style=""> </td><td style=""> </td></tr><tr><td style="">Name:</td><td style="">JAXP Java API for XML Processing 1.2</td></tr><tr><td style="">Author:</td><td style="">Sun Microsystems, Inc.</td></tr><tr><td style="">License:</td><td style=""><a href="license-apache.html" title="Appendix D. The Apache Software License, Version 1.1">Apache Software License</a></td></tr><tr><td style="">URL:</td><td style=""><a href="http://java.sun.com/xml/" target="_top">http://java.sun.com/xml/</a></td></tr><tr><td style=""> </td><td style=""> </td></tr><tr><td style="">Name:</td><td style="">JDOM XML API 1.0 Beta 8</td></tr><tr><td style="">Author:</td><td style="">JDOM Group, lead by Jason Hunter and Brett McLaughlin</td></tr><tr><td style="">License:</td><td style="">BSD/Apache style</td></tr><tr><td style="">URL:</td><td style=""><a href="http://www.jdom.org/" target="_top">http://www.jdom.org/</a></td></tr><tr><td style=""> </td><td style=""> </td></tr><tr><td style="">Name:</td><td style="">log4j logging toolkit 1.2.6</td></tr><tr><td style="">Author:</td><td style="">Apache Software Foundation</td></tr><tr><td style="">License:</td><td style=""><a href="license-apache.html" title="Appendix D. The Apache Software License, Version 1.1">Apache Software License</a></td></tr><tr><td style="" valign="top">Info:</td><td style="">Jalopy specifically needs 1.2.6 or above as I use an accessor that was
41 only introduced with 1.2.6</td></tr><tr><td style="">URL:</td><td style=""><a href="http://jakarta.apache.org/log4j/" target="_top">http://jakarta.apache.org/log4j/</a></td></tr><tr><td style=""> </td><td style=""> </td></tr><tr><td style="">Name:</td><td style="">Moe Editor 1.2.0</td></tr><tr><td style="">Author:</td><td style="">BlueJ Group at Monash University, Slava Pestov</td></tr><tr><td style="">License:</td><td style="">Public Domain</td></tr><tr><td style="" valign="top">Info:</td><td style="">Jalopy incorporates a stripped down version of the syntax package included in the
43 </td></tr><tr><td style="">URL:</td><td style=""><a href="http://www.bluej.org/" target="_top">http://www.bluej.org/</a></td></tr><tr><td style=""> </td><td style=""> </td></tr><tr><td style="">Name:</td><td style="">Oro Regular Expressions 2.0.6</td></tr><tr><td style="">Author:</td><td style="">Apache Software Foundation</td></tr><tr><td style="">License:</td><td style=""><a href="license-apache.html" title="Appendix D. The Apache Software License, Version 1.1">Apache Software License</a></td></tr><tr><td style="">URL:</td><td style=""><a href="http://jakarta.apache.org/oro/" target="_top">http://jakarta.apache.org/oro/</a></td></tr><tr><td style=""> </td><td style=""> </td></tr><tr><td style="">Name:</td><td style="">SAX Simple API for XML 2.0.1 </td></tr><tr><td style="">Author:</td><td style="">David Megginson, David Brownell</td></tr><tr><td style="">License:</td><td style="">Public Domain</td></tr><tr><td style="">URL:</td><td style=""><a href="http://www.saxproject.org/" target="_top">http://www.saxproject.org/</a></td></tr><tr><td style=""> </td><td style=""> </td></tr></tbody></table></div><p></p></div><div class="navfooter"><hr><table width="100%" summary="Navigation footer"><tr><td width="40%" align="left"><a accesskey="p" href="plugin-netbeans-license.html">Prev</a> </td><td width="20%" align="center"><a accesskey="u" href="manual.html">Up</a></td><td width="40%" align="right"> <a accesskey="n" href="license-bsd.html">Next</a></td></tr><tr><td width="40%" align="left" valign="top">11.3. License </td><td width="20%" align="center"><a accesskey="h" href="manual.html">Home</a></td><td width="40%" align="right" valign="top"> Appendix B. The Jalopy BSD License</td></tr></table></div></td></tr></table></td></tr><tr><td bgcolor="#eeeecc" height="17" style="font-size:9px;padding-left:5px"><a href="#toppage">to top</a></td></tr><tr><td height="30"><br></td></tr><tr><td height="3"></td></tr><tr><td bgcolor="#336699" height="1"></td></tr><tr><td height="1"></td></tr><tr><td bgcolor="#336699" height="16"></td></tr><tr><td bgcolor="#ff9966" height="4"></td></tr><tr><td class="footer" align="center" height="15" valign="middle">
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