JAL-4059 Updated swingjs and removed spare library .zip
[jalview.git] / utils / jalviewjs / _j2sclasslist.txt
1 com/github/reinert/jjschema/Attributes.js
2 com/stevesoft/pat/AmpersandRule.js
3 com/stevesoft/pat/Any.js
4 com/stevesoft/pat/BackG.js
5 com/stevesoft/pat/BackMatch.js
6 com/stevesoft/pat/BackRefRule.js
7 com/stevesoft/pat/Backup.js
8 com/stevesoft/pat/BasicStringBufferLike.js
9 com/stevesoft/pat/Bits.js
10 com/stevesoft/pat/Boundary.js
11 com/stevesoft/pat/Bracket.js
12 com/stevesoft/pat/Branch.js
13 com/stevesoft/pat/CaseMgr.js
14 com/stevesoft/pat/ChangeRule.js
15 com/stevesoft/pat/CodeRule.js
16 com/stevesoft/pat/Ctrl.js
17 com/stevesoft/pat/Custom.js
18 com/stevesoft/pat/CustomEndpoint.js
19 com/stevesoft/pat/DirFileRegex.js
20 com/stevesoft/pat/DotMulti.js
21 com/stevesoft/pat/End.js
22 com/stevesoft/pat/FastBracket.js
23 com/stevesoft/pat/FastChar.js
24 com/stevesoft/pat/FastMulti.js
25 com/stevesoft/pat/FileRegex.js
26 com/stevesoft/pat/Group.js
27 com/stevesoft/pat/LeftRule.js
28 com/stevesoft/pat/Multi.js
29 com/stevesoft/pat/MultiMin.js
30 com/stevesoft/pat/Multi_stage2.js
31 com/stevesoft/pat/NUnicodeAlpha.js
32 com/stevesoft/pat/NUnicodeCurrency.js
33 com/stevesoft/pat/NUnicodeDigit.js
34 com/stevesoft/pat/NUnicodeMath.js
35 com/stevesoft/pat/NUnicodePunct.js
36 com/stevesoft/pat/NUnicodeW.js
37 com/stevesoft/pat/NUnicodeWhite.js
38 com/stevesoft/pat/NoPattern.js
39 com/stevesoft/pat/NonDirFileRegex.js
40 com/stevesoft/pat/NotImplementedError.js
41 com/stevesoft/pat/NullPattern.js
42 com/stevesoft/pat/NullRule.js
43 com/stevesoft/pat/Or.js
44 com/stevesoft/pat/OrMark.js
45 com/stevesoft/pat/PartialBuffer.js
46 com/stevesoft/pat/Pattern.js
47 com/stevesoft/pat/PatternSub.js
48 com/stevesoft/pat/PopRule.js
49 com/stevesoft/pat/Prop.js
50 com/stevesoft/pat/Pthings.js
51 com/stevesoft/pat/PushRule.js
52 com/stevesoft/pat/RBuffer.js
53 com/stevesoft/pat/Range.js
54 com/stevesoft/pat/RegOpt.js
55 com/stevesoft/pat/RegRes.js
56 com/stevesoft/pat/RegSyntax.js
57 com/stevesoft/pat/RegSyntaxError.js
58 com/stevesoft/pat/Regex.js
59 com/stevesoft/pat/RegexReader.js
60 com/stevesoft/pat/RegexTokenizer.js
61 com/stevesoft/pat/RegexWriter.js
62 com/stevesoft/pat/ReplaceRule.js
63 com/stevesoft/pat/Replacer.js
64 com/stevesoft/pat/RightRule.js
65 com/stevesoft/pat/Rthings.js
66 com/stevesoft/pat/RuleHolder.js
67 com/stevesoft/pat/Skip.js
68 com/stevesoft/pat/Skip2.js
69 com/stevesoft/pat/SkipBMH.js
70 com/stevesoft/pat/Skipped.js
71 com/stevesoft/pat/SpecialRule.js
72 com/stevesoft/pat/Start.js
73 com/stevesoft/pat/StrPos.js
74 com/stevesoft/pat/StringBufferLike.js
75 com/stevesoft/pat/StringLike.js
76 com/stevesoft/pat/StringRule.js
77 com/stevesoft/pat/SubMark.js
78 com/stevesoft/pat/TransPat.js
79 com/stevesoft/pat/Transformer.js
80 com/stevesoft/pat/UniValidator.js
81 com/stevesoft/pat/UnicodeAlpha.js
82 com/stevesoft/pat/UnicodeCurrency.js
83 com/stevesoft/pat/UnicodeDigit.js
84 com/stevesoft/pat/UnicodeLower.js
85 com/stevesoft/pat/UnicodeMath.js
86 com/stevesoft/pat/UnicodePunct.js
87 com/stevesoft/pat/UnicodeUpper.js
88 com/stevesoft/pat/UnicodeW.js
89 com/stevesoft/pat/UnicodeWhite.js
90 com/stevesoft/pat/Validator.js
91 com/stevesoft/pat/WantMoreTextReplaceRule.js
92 com/stevesoft/pat/lookAhead.js
93 com/stevesoft/pat/oneChar.js
94 com/stevesoft/pat/parsePerl.js
95 com/stevesoft/pat/patInf.js
96 com/stevesoft/pat/patInt.js
97 com/stevesoft/pat/wrap/CharArrayBufferWrap.js
98 com/stevesoft/pat/wrap/CharArrayWrap.js
99 com/stevesoft/pat/wrap/RandomAccessFileWrap.js
100 com/stevesoft/pat/wrap/StringBufferWrap.js
101 com/stevesoft/pat/wrap/StringWrap.js
102 com/stevesoft/pat/wrap/WriterWrap.js
103 core/package.js
104 ext/edu/ucsf/rbvi/strucviz2/ChimUtils.js
105 ext/edu/ucsf/rbvi/strucviz2/ChimeraChain.js
106 ext/edu/ucsf/rbvi/strucviz2/ChimeraManager.js
107 ext/edu/ucsf/rbvi/strucviz2/ChimeraModel.js
108 ext/edu/ucsf/rbvi/strucviz2/ChimeraResidue.js
109 ext/edu/ucsf/rbvi/strucviz2/ChimeraStructuralObject.js
110 ext/edu/ucsf/rbvi/strucviz2/ChimeraTreeModel.js
111 ext/edu/ucsf/rbvi/strucviz2/StructureManager.js
112 ext/edu/ucsf/rbvi/strucviz2/StructureSettings.js
113 ext/edu/ucsf/rbvi/strucviz2/port/ListenerThreads.js
114 ext/vamsas/IRegistry.js
115 ext/vamsas/IRegistryService.js
116 ext/vamsas/IRegistryServiceLocator.js
117 ext/vamsas/Jpred.js
118 ext/vamsas/JpredService.js
119 ext/vamsas/JpredServiceLocator.js
120 ext/vamsas/JpredSoapBindingStub.js
121 ext/vamsas/MuscleWS.js
122 ext/vamsas/MuscleWSService.js
123 ext/vamsas/MuscleWSServiceLocator.js
124 ext/vamsas/MuscleWSSoapBindingStub.js
125 ext/vamsas/RegistryServiceSoapBindingStub.js
126 ext/vamsas/SeqSearchI.js
127 ext/vamsas/SeqSearchServiceLocator.js
128 ext/vamsas/SeqSearchServiceService.js
129 ext/vamsas/SeqSearchServiceSoapBindingStub.js
130 ext/vamsas/ServiceHandle.js
131 ext/vamsas/ServiceHandles.js
132 intervalstore/api/IntervalI.js
133 intervalstore/api/IntervalStoreI.js
134 intervalstore/impl/BinarySearcher.js
135 intervalstore/impl/IntervalStore.js
136 intervalstore/impl/NCList.js
137 intervalstore/impl/NCNode.js
138 jalview/analysis/AAFrequency.js
139 jalview/analysis/AlignSeq.js
140 jalview/analysis/AlignmentAnnotationUtils.js
141 jalview/analysis/AlignmentSorter.js
142 jalview/analysis/AlignmentUtils.js
143 jalview/analysis/AnnotationSorter.js
144 jalview/analysis/AverageDistanceEngine.js
145 jalview/analysis/AverageDistanceTree.js
146 jalview/analysis/CodingUtils.js
147 jalview/analysis/CodonComparator.js
148 jalview/analysis/Conservation.js
149 jalview/analysis/CrossRef.js
150 jalview/analysis/Dna.js
151 jalview/analysis/Finder.js
152 jalview/analysis/GeneticCodeI.js
153 jalview/analysis/GeneticCodes.js
154 jalview/analysis/Grouping.js
155 jalview/analysis/NJTree.js
156 jalview/analysis/PCA.js
157 jalview/analysis/ParseProperties.js
158 jalview/analysis/Rna.js
159 jalview/analysis/SecStrConsensus.js
160 jalview/analysis/SeqsetUtils.js
161 jalview/analysis/SequenceIdMatcher.js
162 jalview/analysis/StructureFrequency.js
163 jalview/analysis/TreeBuilder.js
164 jalview/analysis/TreeEngine.js
165 jalview/analysis/TreeModel.js
166 jalview/analysis/WUSSParseException.js
167 jalview/analysis/scoremodels/DistanceScoreModel.js
168 jalview/analysis/scoremodels/FeatureDistanceModel.js
169 jalview/analysis/scoremodels/PIDModel.js
170 jalview/analysis/scoremodels/ScoreMatrix.js
171 jalview/analysis/scoremodels/ScoreModels.js
172 jalview/analysis/scoremodels/SimilarityParams.js
173 jalview/analysis/scoremodels/SimilarityScoreModel.js
174 jalview/analysis/scoremodels/SmithWatermanModel.js
175 jalview/analytics/Plausible.js
176 jalview/api/AlignCalcManagerI.js
177 jalview/api/AlignCalcWorkerI.js
178 jalview/api/AlignExportSettingsI.js
179 jalview/api/AlignViewControllerGuiI.js
180 jalview/api/AlignViewControllerI.js
181 jalview/api/AlignViewportI.js
182 jalview/api/AlignmentColsCollectionI.js
183 jalview/api/AlignmentRowsCollectionI.js
184 jalview/api/AlignmentViewPanel.js
185 jalview/api/BuildDetailsI.js
186 jalview/api/ComplexAlignFile.js
187 jalview/api/DBRefEntryI.js
188 jalview/api/FeatureColourI.js
189 jalview/api/FeatureRenderer.js
190 jalview/api/FeatureSettingsControllerI.js
191 jalview/api/FeatureSettingsModelI.js
192 jalview/api/FeaturesDisplayedI.js
193 jalview/api/FeaturesSourceI.js
194 jalview/api/FinderI.js
195 jalview/api/OOMHandlerI.js
196 jalview/api/RendererListenerI.js
197 jalview/api/RotatableCanvasI.js
198 jalview/api/SequenceRenderer.js
199 jalview/api/SequenceStructureBinding.js
200 jalview/api/SiftsClientI.js
201 jalview/api/SplitContainerI.js
202 jalview/api/StructureSelectionManagerProvider.js
203 jalview/api/ViewStyleI.js
204 jalview/api/analysis/PairwiseScoreModelI.js
205 jalview/api/analysis/ScoreModelI.js
206 jalview/api/analysis/SimilarityParamsI.js
207 jalview/api/structures/JalviewStructureDisplayI.js
208 jalview/appletgui/APopupMenu.js
209 jalview/appletgui/AlignFrame.js
210 jalview/appletgui/AlignViewport.js
211 jalview/appletgui/AlignmentPanel.js
212 jalview/appletgui/AnnotationColourChooser.js
213 jalview/appletgui/AnnotationColumnChooser.js
214 jalview/appletgui/AnnotationLabels.js
215 jalview/appletgui/AnnotationPanel.js
216 jalview/appletgui/AnnotationRowFilter.js
217 jalview/appletgui/AppletJmol.js
218 jalview/appletgui/AppletJmolBinding.js
219 jalview/appletgui/CutAndPasteTransfer.js
220 jalview/appletgui/EditNameDialog.js
221 jalview/appletgui/EmbmenuFrame.js
222 jalview/appletgui/ExtJmol.js
223 jalview/appletgui/FeatureColourChooser.js
224 jalview/appletgui/FeatureRenderer.js
225 jalview/appletgui/FeatureSettings.js
226 jalview/appletgui/Finder.js
227 jalview/appletgui/FontChooser.js
228 jalview/appletgui/IdCanvas.js
229 jalview/appletgui/IdPanel.js
230 jalview/appletgui/IdwidthAdjuster.js
231 jalview/appletgui/JVDialog.js
232 jalview/appletgui/OverviewCanvas.js
233 jalview/appletgui/OverviewPanel.js
234 jalview/appletgui/PCAPanel.js
235 jalview/appletgui/PaintRefresher.js
236 jalview/appletgui/PairwiseAlignPanel.js
237 jalview/appletgui/RedundancyPanel.js
238 jalview/appletgui/RotatableCanvas.js
239 jalview/appletgui/ScalePanel.js
240 jalview/appletgui/SeqCanvas.js
241 jalview/appletgui/SeqPanel.js
242 jalview/appletgui/SequenceRenderer.js
243 jalview/appletgui/SliderPanel.js
244 jalview/appletgui/SplitFrame.js
245 jalview/appletgui/TitledPanel.js
246 jalview/appletgui/Tooltip.js
247 jalview/appletgui/TreeCanvas.js
248 jalview/appletgui/TreePanel.js
249 jalview/appletgui/UserDefinedColours.js
250 jalview/bin/ArgsParser.js
251 jalview/bin/BuildDetails.js
252 jalview/bin/Cache.js
253 jalview/bin/Commands.js
254 jalview/bin/Console.js
255 jalview/bin/GetMemory.js
256 jalview/bin/HiDPISetting.js
257 jalview/bin/Jalview.js
258 jalview/bin/JalviewJS2.js
259 jalview/bin/JalviewLite.js
260 jalview/bin/JalviewLiteURLRetrieve.js
261 jalview/bin/JalviewTaskbar.js
262 jalview/bin/Launcher.js
263 jalview/bin/MemorySetting.js
264 jalview/bin/ScreenInfo.js
265 jalview/bin/argparser/Arg.js
266 jalview/bin/argparser/ArgParser.js
267 jalview/bin/argparser/ArgValue.js
268 jalview/bin/argparser/ArgValues.js
269 jalview/bin/argparser/ArgValuesMap.js
270 jalview/bin/argparser/BootstrapArgs.js
271 jalview/bin/argparser/SubVals.js
272 jalview/bin/groovy/JalviewObject.js
273 jalview/bin/groovy/JalviewObjectI.js
274 jalview/commands/ChangeCaseCommand.js
275 jalview/commands/CommandI.js
276 jalview/commands/EditCommand.js
277 jalview/commands/OrderCommand.js
278 jalview/commands/RemoveGapColCommand.js
279 jalview/commands/RemoveGapsCommand.js
280 jalview/commands/SlideSequencesCommand.js
281 jalview/commands/TrimRegionCommand.js
282 jalview/controller/AlignViewController.js
283 jalview/controller/FeatureSettingsController.js
284 jalview/controller/FeatureSettingsControllerGuiI.js
285 jalview/datamodel/ASequence.js
286 jalview/datamodel/ASequenceI.js
287 jalview/datamodel/AlignExportSettingsAdapter.js
288 jalview/datamodel/AlignedCodon.js
289 jalview/datamodel/AlignedCodonFrame.js
290 jalview/datamodel/Alignment.js
291 jalview/datamodel/AlignmentAnnotation.js
292 jalview/datamodel/AlignmentExportData.js
293 jalview/datamodel/AlignmentI.js
294 jalview/datamodel/AlignmentOrder.js
295 jalview/datamodel/AlignmentView.js
296 jalview/datamodel/AllColsCollection.js
297 jalview/datamodel/AllColsIterator.js
298 jalview/datamodel/AllRowsCollection.js
299 jalview/datamodel/AllRowsIterator.js
300 jalview/datamodel/AnnotatedCollectionI.js
301 jalview/datamodel/Annotation.js
302 jalview/datamodel/BinaryNode.js
303 jalview/datamodel/BinarySequence.js
304 jalview/datamodel/CigarArray.js
305 jalview/datamodel/CigarBase.js
306 jalview/datamodel/CigarCigar.js
307 jalview/datamodel/CigarSimple.js
308 jalview/datamodel/ColumnSelection.js
309 jalview/datamodel/ContactListI.js
310 jalview/datamodel/ContactListImpl.js
311 jalview/datamodel/ContactListProviderI.js
312 jalview/datamodel/ContactMapHolder.js
313 jalview/datamodel/ContactMapHolderI.js
314 jalview/datamodel/ContactMatrix.js
315 jalview/datamodel/ContactMatrixI.js
316 jalview/datamodel/ContactRange.js
317 jalview/datamodel/ContiguousI.js
318 jalview/datamodel/DBRefEntry.js
319 jalview/datamodel/DBRefSource.js
320 jalview/datamodel/FeatureProperties.js
321 jalview/datamodel/FloatContactMatrix.js
322 jalview/datamodel/GeneLociI.js
323 jalview/datamodel/GeneLocus.js
324 jalview/datamodel/GraphLine.js
325 jalview/datamodel/GroupSet.js
326 jalview/datamodel/GroupSetHolder.js
327 jalview/datamodel/GroupSetI.js
328 jalview/datamodel/HiddenColumns.js
329 jalview/datamodel/HiddenColumnsCursor.js
330 jalview/datamodel/HiddenCursorPosition.js
331 jalview/datamodel/HiddenSequences.js
332 jalview/datamodel/IncompleteCodonException.js
333 jalview/datamodel/MappedFeatures.js
334 jalview/datamodel/Mapping.js
335 jalview/datamodel/MappingType.js
336 jalview/datamodel/NodeTransformI.js
337 jalview/datamodel/PDBEntry.js
338 jalview/datamodel/Point.js
339 jalview/datamodel/Profile.js
340 jalview/datamodel/ProfileI.js
341 jalview/datamodel/Profiles.js
342 jalview/datamodel/ProfilesI.js
343 jalview/datamodel/Provenance.js
344 jalview/datamodel/ProvenanceEntry.js
345 jalview/datamodel/Range.js
346 jalview/datamodel/RangeElementsIterator.js
347 jalview/datamodel/RangeIterator.js
348 jalview/datamodel/ResidueCount.js
349 jalview/datamodel/RnaViewerModel.js
350 jalview/datamodel/SearchResultMatchI.js
351 jalview/datamodel/SearchResults.js
352 jalview/datamodel/SearchResultsI.js
353 jalview/datamodel/SecondaryStructureAnnotation.js
354 jalview/datamodel/SeqCigar.js
355 jalview/datamodel/SeqDistanceContactMatrix.js
356 jalview/datamodel/Sequence.js
357 jalview/datamodel/SequenceCollectionI.js
358 jalview/datamodel/SequenceCursor.js
359 jalview/datamodel/SequenceDummy.js
360 jalview/datamodel/SequenceFeature.js
361 jalview/datamodel/SequenceGroup.js
362 jalview/datamodel/SequenceI.js
363 jalview/datamodel/SequenceNode.js
364 jalview/datamodel/SequencePoint.js
365 jalview/datamodel/StartRegionIterator.js
366 jalview/datamodel/StructureViewerModel.js
367 jalview/datamodel/VisibleColsCollection.js
368 jalview/datamodel/VisibleContigsIterator.js
369 jalview/datamodel/VisibleRowsCollection.js
370 jalview/datamodel/VisibleRowsIterator.js
371 jalview/datamodel/annotations/AlphaFoldAnnotationRowBuilder.js
372 jalview/datamodel/annotations/AnnotationRowBuilder.js
373 jalview/datamodel/features/FeatureAttributeType.js
374 jalview/datamodel/features/FeatureAttributes.js
375 jalview/datamodel/features/FeatureLocationI.js
376 jalview/datamodel/features/FeatureMatcher.js
377 jalview/datamodel/features/FeatureMatcherI.js
378 jalview/datamodel/features/FeatureMatcherSet.js
379 jalview/datamodel/features/FeatureMatcherSetI.js
380 jalview/datamodel/features/FeatureSource.js
381 jalview/datamodel/features/FeatureSourceI.js
382 jalview/datamodel/features/FeatureSources.js
383 jalview/datamodel/features/FeatureStore.js
384 jalview/datamodel/features/SequenceFeatures.js
385 jalview/datamodel/features/SequenceFeaturesI.js
386 jalview/exceptions/JalviewException.js
387 jalview/ext/android/ContainerHelpers.js
388 jalview/ext/android/SparseDoubleArray.js
389 jalview/ext/android/SparseIntArray.js
390 jalview/ext/android/SparseShortArray.js
391 jalview/ext/ensembl/EnsemblCdna.js
392 jalview/ext/ensembl/EnsemblCds.js
393 jalview/ext/ensembl/EnsemblData.js
394 jalview/ext/ensembl/EnsemblFeatures.js
395 jalview/ext/ensembl/EnsemblGene.js
396 jalview/ext/ensembl/EnsemblGenome.js
397 jalview/ext/ensembl/EnsemblGenomes.js
398 jalview/ext/ensembl/EnsemblInfo.js
399 jalview/ext/ensembl/EnsemblLookup.js
400 jalview/ext/ensembl/EnsemblMap.js
401 jalview/ext/ensembl/EnsemblProtein.js
402 jalview/ext/ensembl/EnsemblRestClient.js
403 jalview/ext/ensembl/EnsemblSeqProxy.js
404 jalview/ext/ensembl/EnsemblSequenceFetcher.js
405 jalview/ext/ensembl/EnsemblSymbol.js
406 jalview/ext/ensembl/EnsemblXref.js
407 jalview/ext/ensembl/Species.js
408 jalview/ext/htsjdk/HtsContigDb.js
409 jalview/ext/htsjdk/VCFReader.js
410 jalview/ext/jmol/JalviewJmolBinding.js
411 jalview/ext/jmol/JmolCommands.js
412 jalview/ext/jmol/JmolParser.js
413 jalview/ext/paradise/Annotate3D.js
414 jalview/ext/pymol/PymolCommands.js
415 jalview/ext/pymol/PymolManager.js
416 jalview/ext/rbvi/chimera/ChimeraCommands.js
417 jalview/ext/rbvi/chimera/ChimeraListener.js
418 jalview/ext/rbvi/chimera/ChimeraXCommands.js
419 jalview/ext/rbvi/chimera/ChimeraXManager.js
420 jalview/ext/rbvi/chimera/JalviewChimeraBinding.js
421 jalview/ext/so/SequenceOntology.js
422 jalview/ext/varna/JalviewVarnaBinding.js
423 jalview/ext/varna/RnaModel.js
424 jalview/ext/varna/VarnaCommands.js
425 jalview/fts/api/FTSData.js
426 jalview/fts/api/FTSDataColumnI.js
427 jalview/fts/api/FTSRestClientI.js
428 jalview/fts/api/GFTSPanelI.js
429 jalview/fts/api/StructureFTSRestClientI.js
430 jalview/fts/core/DecimalFormatTableCellRenderer.js
431 jalview/fts/core/FTSDataColumnPreferences.js
432 jalview/fts/core/FTSRestClient.js
433 jalview/fts/core/FTSRestRequest.js
434 jalview/fts/core/FTSRestResponse.js
435 jalview/fts/core/GFTSPanel.js
436 jalview/fts/service/alphafold/AlphafoldRestClient.js
437 jalview/fts/service/pdb/PDBFTSPanel.js
438 jalview/fts/service/pdb/PDBFTSRestClient.js
439 jalview/fts/service/threedbeacons/TDB_FTSData.js
440 jalview/fts/service/threedbeacons/TDBeaconsFTSPanel.js
441 jalview/fts/service/threedbeacons/TDBeaconsFTSRestClient.js
442 jalview/fts/service/uniprot/UniProtFTSRestClient.js
443 jalview/fts/service/uniprot/UniprotFTSPanel.js
444 jalview/gui/APQHandlers.js
445 jalview/gui/AlignExportOptions.js
446 jalview/gui/AlignFrame.js
447 jalview/gui/AlignViewport.js
448 jalview/gui/AlignmentPanel.js
449 jalview/gui/AnnotationChooser.js
450 jalview/gui/AnnotationColourChooser.js
451 jalview/gui/AnnotationColumnChooser.js
452 jalview/gui/AnnotationExporter.js
453 jalview/gui/AnnotationLabels.js
454 jalview/gui/AnnotationPanel.js
455 jalview/gui/AnnotationRowFilter.js
456 jalview/gui/AppJmol.js
457 jalview/gui/AppJmolBinding.js
458 jalview/gui/AppVarna.js
459 jalview/gui/AppVarnaBinding.js
460 jalview/gui/AssociatePdbFileWithSeq.js
461 jalview/gui/BlogReader.js
462 jalview/gui/CalculationChooser.js
463 jalview/gui/ChimeraViewFrame.js
464 jalview/gui/ChimeraXViewFrame.js
465 jalview/gui/ColourMenuHelper.js
466 jalview/gui/ComboBoxTooltipRenderer.js
467 jalview/gui/Console.js
468 jalview/gui/CrossRefAction.js
469 jalview/gui/CutAndPasteHtmlTransfer.js
470 jalview/gui/CutAndPasteTransfer.js
471 jalview/gui/Desktop.js
472 jalview/gui/EditNameDialog.js
473 jalview/gui/FeatureEditor.js
474 jalview/gui/FeatureRenderer.js
475 jalview/gui/FeatureSettings.js
476 jalview/gui/FeatureTypeSettings.js
477 jalview/gui/Finder.js
478 jalview/gui/FontChooser.js
479 jalview/gui/Help.js
480 jalview/gui/IProgressIndicator.js
481 jalview/gui/IProgressIndicatorHandler.js
482 jalview/gui/IdCanvas.js
483 jalview/gui/IdPanel.js
484 jalview/gui/IdwidthAdjuster.js
485 jalview/gui/ImageExporter.js
486 jalview/gui/JDatabaseTree.js
487 jalview/gui/JalviewBooleanRadioButtons.js
488 jalview/gui/JalviewChangeSupport.js
489 jalview/gui/JalviewChimeraBindingModel.js
490 jalview/gui/JalviewChimeraXBindingModel.js
491 jalview/gui/JalviewColourChooser.js
492 jalview/gui/JalviewDialog.js
493 jalview/gui/JvOptionPane.js
494 jalview/gui/JvSwingUtils.js
495 jalview/gui/LineartOptions.js
496 jalview/gui/MenuChooser.js
497 jalview/gui/OOMWarning.js
498 jalview/gui/OptsAndParamsPage.js
499 jalview/gui/OptsParametersContainerI.js
500 jalview/gui/OverviewCanvas.js
501 jalview/gui/OverviewPanel.js
502 jalview/gui/PCAPanel.js
503 jalview/gui/PaintRefresher.js
504 jalview/gui/PairwiseAlignPanel.js
505 jalview/gui/PopupMenu.js
506 jalview/gui/Preferences.js
507 jalview/gui/ProgressBar.js
508 jalview/gui/ProgressPanel.js
509 jalview/gui/PromptUserConfig.js
510 jalview/gui/PymolBindingModel.js
511 jalview/gui/PymolViewer.js
512 jalview/gui/QuitHandler.js
513 jalview/gui/RedundancyPanel.js
514 jalview/gui/RestInputParamEditDialog.js
515 jalview/gui/RestServiceEditorPane.js
516 jalview/gui/RotatableCanvas.js
517 jalview/gui/ScalePanel.js
518 jalview/gui/SeqCanvas.js
519 jalview/gui/SeqPanel.js
520 jalview/gui/SequenceFetcher.js
521 jalview/gui/SequenceRenderer.js
522 jalview/gui/Slider.js
523 jalview/gui/SliderPanel.js
524 jalview/gui/SplashScreen.js
525 jalview/gui/SplitFrame.js
526 jalview/gui/StructureChooser.js
527 jalview/gui/StructureViewer.js
528 jalview/gui/StructureViewerBase.js
529 jalview/gui/TextColourChooser.js
530 jalview/gui/TreeCanvas.js
531 jalview/gui/TreePanel.js
532 jalview/gui/UserDefinedColours.js
533 jalview/gui/UserQuestionnaireCheck.js
534 jalview/gui/VamsasApplication.js
535 jalview/gui/ViewSelectionMenu.js
536 jalview/gui/WebserviceInfo.js
537 jalview/gui/WsJobParameters.js
538 jalview/gui/WsParamSetManager.js
539 jalview/gui/WsPreferences.js
540 jalview/gui/structurechooser/PDBStructureChooserQuerySource.js
541 jalview/gui/structurechooser/StructureChooserQuerySource.js
542 jalview/gui/structurechooser/TDBResultAnalyser.js
543 jalview/gui/structurechooser/ThreeDBStructureChooserQuerySource.js
544 jalview/httpserver/AbstractRequestHandler.js
545 jalview/httpserver/HttpServer.js
546 jalview/io/AMSAFile.js
547 jalview/io/AlignFile.js
548 jalview/io/AlignmentFileReaderI.js
549 jalview/io/AlignmentFileWriterI.js
550 jalview/io/AlignmentProperties.js
551 jalview/io/AnnotationFile.js
552 jalview/io/AppletFormatAdapter.js
553 jalview/io/BLCFile.js
554 jalview/io/BackupFilenameFilter.js
555 jalview/io/BackupFilenameParts.js
556 jalview/io/BackupFiles.js
557 jalview/io/BackupFilesPresetEntry.js
558 jalview/io/BioJsHTMLOutput.js
559 jalview/io/ClustalFile.js
560 jalview/io/DBRefFile.js
561 jalview/io/DataSourceType.js
562 jalview/io/EMBLLikeFlatFile.js
563 jalview/io/EmblFlatFile.js
564 jalview/io/FastaFile.js
565 jalview/io/FeaturesFile.js
566 jalview/io/FileFormat.js
567 jalview/io/FileFormatException.js
568 jalview/io/FileFormatI.js
569 jalview/io/FileFormats.js
570 jalview/io/FileLoader.js
571 jalview/io/FileParse.js
572 jalview/io/FormatAdapter.js
573 jalview/io/GenBankFile.js
574 jalview/io/HTMLOutput.js
575 jalview/io/HtmlFile.js
576 jalview/io/HtmlSvgOutput.js
577 jalview/io/IdentifyFile.js
578 jalview/io/InputStreamParser.js
579 jalview/io/IntKeyStringValueEntry.js
580 jalview/io/JPredFile.js
581 jalview/io/JSONFile.js
582 jalview/io/JalviewFileChooser.js
583 jalview/io/JalviewFileFilter.js
584 jalview/io/JalviewFileView.js
585 jalview/io/JnetAnnotationMaker.js
586 jalview/io/MSFfile.js
587 jalview/io/ModellerDescription.js
588 jalview/io/NewickFile.js
589 jalview/io/PContactPredictionFile.js
590 jalview/io/PDBFeatureSettings.js
591 jalview/io/PIRFile.js
592 jalview/io/PfamFile.js
593 jalview/io/PhylipFile.js
594 jalview/io/PileUpfile.js
595 jalview/io/RnamlFile.js
596 jalview/io/ScoreMatrixFile.js
597 jalview/io/SequenceAnnotationReport.js
598 jalview/io/SimpleBlastFile.js
599 jalview/io/StockholmFile.js
600 jalview/io/StructureFile.js
601 jalview/io/TCoffeeScoreFile.js
602 jalview/io/VamsasAppDatastore.js
603 jalview/io/WSWUBlastClient.js
604 jalview/io/cache/AppCache.js
605 jalview/io/cache/JvCacheableInputBox.js
606 jalview/io/exceptions/ImageOutputException.js
607 jalview/io/gff/ExonerateHelper.js
608 jalview/io/gff/Gff2Helper.js
609 jalview/io/gff/Gff3Helper.js
610 jalview/io/gff/GffConstants.js
611 jalview/io/gff/GffHelperBase.js
612 jalview/io/gff/GffHelperFactory.js
613 jalview/io/gff/GffHelperI.js
614 jalview/io/gff/InterProScanHelper.js
615 jalview/io/gff/SequenceOntologyFactory.js
616 jalview/io/gff/SequenceOntologyI.js
617 jalview/io/gff/SequenceOntologyLite.js
618 jalview/io/packed/DataProvider.js
619 jalview/io/packed/JalviewDataset.js
620 jalview/io/packed/ParsePackedSet.js
621 jalview/io/packed/SimpleDataProvider.js
622 jalview/io/vamsas/Datasetsequence.js
623 jalview/io/vamsas/DatastoreItem.js
624 jalview/io/vamsas/DatastoreRegistry.js
625 jalview/io/vamsas/Dbref.js
626 jalview/io/vamsas/LocalDocSyncObject.js
627 jalview/io/vamsas/Rangetype.js
628 jalview/io/vamsas/Sequencefeature.js
629 jalview/io/vamsas/Sequencemapping.js
630 jalview/io/vamsas/Tree.js
631 jalview/io/vcf/VCFLoader.js
632 jalview/javascript/JSFunctionExec.js
633 jalview/javascript/JalviewLiteJsApi.js
634 jalview/javascript/JsCallBack.js
635 jalview/javascript/JsSelectionSender.js
636 jalview/javascript/MouseOverListener.js
637 jalview/javascript/MouseOverStructureListener.js
638 jalview/javascript/json/JSON.js
639 jalview/javascript/web/Client.js
640 jalview/javascript/web/ClientResponse.js
641 jalview/javascript/web/WebResource.js
642 jalview/jbgui/FilterOption.js
643 jalview/jbgui/GAlignFrame.js
644 jalview/jbgui/GAlignmentPanel.js
645 jalview/jbgui/GCutAndPasteHtmlTransfer.js
646 jalview/jbgui/GCutAndPasteTransfer.js
647 jalview/jbgui/GDesktop.js
648 jalview/jbgui/GFinder.js
649 jalview/jbgui/GFontChooser.js
650 jalview/jbgui/GPCAPanel.js
651 jalview/jbgui/GPairwiseAlignPanel.js
652 jalview/jbgui/GPreferences.js
653 jalview/jbgui/GRestInputParamEditDialog.js
654 jalview/jbgui/GRestServiceEditorPane.js
655 jalview/jbgui/GRnaStructureViewer.js
656 jalview/jbgui/GSequenceLink.js
657 jalview/jbgui/GSliderPanel.js
658 jalview/jbgui/GSplitFrame.js
659 jalview/jbgui/GStructureChooser.js
660 jalview/jbgui/GStructureViewer.js
661 jalview/jbgui/GTreePanel.js
662 jalview/jbgui/GUserDefinedColours.js
663 jalview/jbgui/GWebserviceInfo.js
664 jalview/jbgui/GWsPreferences.js
665 jalview/json/binding/biojs/BioJSReleasePojo.js
666 jalview/json/binding/biojs/BioJSRepositoryPojo.js
667 jalview/json/binding/biojson/v1/AlignmentAnnotationPojo.js
668 jalview/json/binding/biojson/v1/AlignmentPojo.js
669 jalview/json/binding/biojson/v1/AnnotationDisplaySettingPojo.js
670 jalview/json/binding/biojson/v1/AnnotationPojo.js
671 jalview/json/binding/biojson/v1/ColourSchemeMapper.js
672 jalview/json/binding/biojson/v1/SequenceFeaturesPojo.js
673 jalview/json/binding/biojson/v1/SequenceGrpPojo.js
674 jalview/json/binding/biojson/v1/SequencePojo.js
675 jalview/log/JLogger.js
676 jalview/log/JLoggerI.js
677 jalview/log/JLoggerLog4j.js
678 jalview/log/JalviewAppender.js
679 jalview/math/AlignmentDimension.js
680 jalview/math/Matrix.js
681 jalview/math/MatrixI.js
682 jalview/math/RotatableMatrix.js
683 jalview/math/SparseMatrix.js
684 jalview/project/Jalview2XML.js
685 jalview/renderer/AnnotationRenderer.js
686 jalview/renderer/AnnotationRendererFactory.js
687 jalview/renderer/AwtRenderPanelI.js
688 jalview/renderer/ContactGeometry.js
689 jalview/renderer/ContactMapRenderer.js
690 jalview/renderer/OverviewRenderer.js
691 jalview/renderer/OverviewResColourFinder.js
692 jalview/renderer/ResidueColourFinder.js
693 jalview/renderer/ResidueShader.js
694 jalview/renderer/ResidueShaderI.js
695 jalview/renderer/ScaleRenderer.js
696 jalview/renderer/api/AnnotationRendererFactoryI.js
697 jalview/renderer/api/AnnotationRowRendererI.js
698 jalview/renderer/seqfeatures/FeatureColourFinder.js
699 jalview/renderer/seqfeatures/FeatureRenderer.js
700 jalview/rest/RestHandler.js
701 jalview/schemes/AnnotationColourGradient.js
702 jalview/schemes/BlossomColourScheme.js
703 jalview/schemes/Blosum62ColourScheme.js
704 jalview/schemes/BuriedColourScheme.js
705 jalview/schemes/ClustalxColourScheme.js
706 jalview/schemes/ColourSchemeI.js
707 jalview/schemes/ColourSchemeLoader.js
708 jalview/schemes/ColourSchemeProperty.js
709 jalview/schemes/ColourSchemes.js
710 jalview/schemes/Consensus.js
711 jalview/schemes/CovariationColourScheme.js
712 jalview/schemes/FeatureColour.js
713 jalview/schemes/FeatureSettingsAdapter.js
714 jalview/schemes/FlowerColourScheme.js
715 jalview/schemes/FollowerColourScheme.js
716 jalview/schemes/HelixColourScheme.js
717 jalview/schemes/HydrophobicColourScheme.js
718 jalview/schemes/IdColourScheme.js
719 jalview/schemes/JalviewColourScheme.js
720 jalview/schemes/NucleotideAmbiguityColourScheme.js
721 jalview/schemes/NucleotideColourScheme.js
722 jalview/schemes/OceanColourScheme.js
723 jalview/schemes/PIDColourScheme.js
724 jalview/schemes/PurinePyrimidineColourScheme.js
725 jalview/schemes/RNAHelicesColour.js
726 jalview/schemes/RNAHelicesColourChooser.js
727 jalview/schemes/RNAInteractionColourScheme.js
728 jalview/schemes/ResidueColourScheme.js
729 jalview/schemes/ResidueProperties.js
730 jalview/schemes/ScoreColourScheme.js
731 jalview/schemes/StrandColourScheme.js
732 jalview/schemes/SunsetColourScheme.js
733 jalview/schemes/TCoffeeColourScheme.js
734 jalview/schemes/TaylorColourScheme.js
735 jalview/schemes/TurnColourScheme.js
736 jalview/schemes/UserColourScheme.js
737 jalview/schemes/ZappoColourScheme.js
738 jalview/structure/AlignmentViewPanelListener.js
739 jalview/structure/AtomSpec.js
740 jalview/structure/AtomSpecModel.js
741 jalview/structure/CommandListener.js
742 jalview/structure/SecondaryStructureListener.js
743 jalview/structure/SelectionListener.js
744 jalview/structure/SelectionSource.js
745 jalview/structure/SequenceListener.js
746 jalview/structure/StructureCommand.js
747 jalview/structure/StructureCommandI.js
748 jalview/structure/StructureCommandsBase.js
749 jalview/structure/StructureCommandsI.js
750 jalview/structure/StructureImportSettings.js
751 jalview/structure/StructureListener.js
752 jalview/structure/StructureMapping.js
753 jalview/structure/StructureMappingcommandSet.js
754 jalview/structure/StructureSelectionManager.js
755 jalview/structure/VamsasListener.js
756 jalview/structure/VamsasSource.js
757 jalview/structures/models/AAStructureBindingModel.js
758 jalview/structures/models/SequenceStructureBindingModel.js
759 jalview/urls/CustomUrlProvider.js
760 jalview/urls/IdOrgSettings.js
761 jalview/urls/IdentifiersUrlProvider.js
762 jalview/urls/UrlLinkDisplay.js
763 jalview/urls/UrlLinkTableModel.js
764 jalview/urls/UrlProvider.js
765 jalview/urls/UrlProviderImpl.js
766 jalview/urls/api/UrlProviderFactoryI.js
767 jalview/urls/api/UrlProviderI.js
768 jalview/urls/applet/AppletUrlProviderFactory.js
769 jalview/urls/desktop/DesktopUrlProviderFactory.js
770 jalview/util/AWTConsole.js
771 jalview/util/ArrayUtils.js
772 jalview/util/BrowserLauncher.js
773 jalview/util/CaseInsensitiveString.js
774 jalview/util/ChannelProperties.js
775 jalview/util/ColorUtils.js
776 jalview/util/Comparison.js
777 jalview/util/DBRefUtils.js
778 jalview/util/DnaUtils.js
779 jalview/util/FileUtils.js
780 jalview/util/Format.js
781 jalview/util/GroupUrlLink.js
782 jalview/util/HttpUtils.js
783 jalview/util/IdUtils.js
784 jalview/util/ImageMaker.js
785 jalview/util/IntRangeComparator.js
786 jalview/util/JSONUtils.js
787 jalview/util/LaunchUtils.js
788 jalview/util/LinkedIdentityHashSet.js
789 jalview/util/Log4j.js
790 jalview/util/MapList.js
791 jalview/util/MapUtils.js
792 jalview/util/MappingUtils.js
793 jalview/util/MathUtils.js
794 jalview/util/MessageManager.js
795 jalview/util/ParseHtmlBodyAndLinks.js
796 jalview/util/Platform.js
797 jalview/util/QuickSort.js
798 jalview/util/ReverseListIterator.js
799 jalview/util/SetUtils.js
800 jalview/util/ShiftList.js
801 jalview/util/ShortcutKeyMaskExWrapper.js
802 jalview/util/ShortcutKeyMaskExWrapper11.js
803 jalview/util/ShortcutKeyMaskExWrapper8.js
804 jalview/util/ShortcutKeyMaskExWrapperI.js
805 jalview/util/SparseCount.js
806 jalview/util/StringUtils.js
807 jalview/util/TableSorter.js
808 jalview/util/UrlConstants.js
809 jalview/util/UrlLink.js
810 jalview/util/dialogrunner/DialogRunnerI.js
811 jalview/util/imagemaker/BitmapImageSizing.js
812 jalview/util/jarInputStreamProvider.js
813 jalview/util/matcher/Condition.js
814 jalview/util/matcher/Matcher.js
815 jalview/util/matcher/MatcherI.js
816 jalview/viewmodel/AlignmentViewport.js
817 jalview/viewmodel/OverviewDimensions.js
818 jalview/viewmodel/OverviewDimensionsHideHidden.js
819 jalview/viewmodel/OverviewDimensionsShowHidden.js
820 jalview/viewmodel/PCAModel.js
821 jalview/viewmodel/ViewportListenerI.js
822 jalview/viewmodel/ViewportProperties.js
823 jalview/viewmodel/ViewportRanges.js
824 jalview/viewmodel/annotationfilter/AnnotationFilterParameter.js
825 jalview/viewmodel/seqfeatures/FeatureRendererModel.js
826 jalview/viewmodel/seqfeatures/FeatureRendererSettings.js
827 jalview/viewmodel/seqfeatures/FeatureSettingsModel.js
828 jalview/viewmodel/seqfeatures/FeaturesDisplayed.js
829 jalview/viewmodel/styles/ViewStyle.js
830 jalview/workers/AlignCalcManager.js
831 jalview/workers/AlignCalcWorker.js
832 jalview/workers/AlignmentAnnotationFactory.js
833 jalview/workers/AnnotationProviderI.js
834 jalview/workers/AnnotationWorker.js
835 jalview/workers/ColumnCounterSetWorker.js
836 jalview/workers/ComplementConsensusThread.js
837 jalview/workers/ConsensusThread.js
838 jalview/workers/ConservationThread.js
839 jalview/workers/FeatureSetCounterI.js
840 jalview/workers/StrucConsensusThread.js
841 jalview/ws/AWSThread.js
842 jalview/ws/AWsJob.js
843 jalview/ws/DBRefFetcher.js
844 jalview/ws/HttpClientUtils.js
845 jalview/ws/JobStateSummary.js
846 jalview/ws/SequenceFetcher.js
847 jalview/ws/SequenceFetcherFactory.js
848 jalview/ws/WSClient.js
849 jalview/ws/WSClientI.js
850 jalview/ws/WSMenuEntryProviderI.js
851 jalview/ws/datamodel/MappableContactMatrixI.js
852 jalview/ws/datamodel/alphafold/MappableContactMatrix.js
853 jalview/ws/datamodel/alphafold/PAEContactMatrix.js
854 jalview/ws/dbsources/EBIAlfaFold.js
855 jalview/ws/dbsources/EbiFileRetrievedProxy.js
856 jalview/ws/dbsources/EmblCdsSource.js
857 jalview/ws/dbsources/EmblFlatfileSource.js
858 jalview/ws/dbsources/EmblSource.js
859 jalview/ws/dbsources/EmblXmlSource.js
860 jalview/ws/dbsources/GeneDbSource.js
861 jalview/ws/dbsources/Pdb.js
862 jalview/ws/dbsources/Pfam.js
863 jalview/ws/dbsources/PfamFull.js
864 jalview/ws/dbsources/PfamSeed.js
865 jalview/ws/dbsources/Rfam.js
866 jalview/ws/dbsources/RfamFull.js
867 jalview/ws/dbsources/RfamSeed.js
868 jalview/ws/dbsources/TDBeacons.js
869 jalview/ws/dbsources/Uniprot.js
870 jalview/ws/dbsources/UniprotName.js
871 jalview/ws/dbsources/Xfam.js
872 jalview/ws/ebi/EBIFetchClient.js
873 jalview/ws/io/mime/HttpContentHandler.js
874 jalview/ws/io/mime/JalviewMimeContentHandler.js
875 jalview/ws/io/mime/MimeTypes.js
876 jalview/ws/jws1/Annotate3D.js
877 jalview/ws/jws1/Discoverer.js
878 jalview/ws/jws1/JPredClient.js
879 jalview/ws/jws1/JPredThread.js
880 jalview/ws/jws1/JWS1Thread.js
881 jalview/ws/jws1/MsaWSClient.js
882 jalview/ws/jws1/MsaWSThread.js
883 jalview/ws/jws1/SeqSearchWSClient.js
884 jalview/ws/jws1/SeqSearchWSThread.js
885 jalview/ws/jws1/WS1Client.js
886 jalview/ws/jws1/WSJob.js
887 jalview/ws/jws2/AAConClient.js
888 jalview/ws/jws2/AADisorderClient.js
889 jalview/ws/jws2/AWS2Thread.js
890 jalview/ws/jws2/AbstractJabaCalcWorker.js
891 jalview/ws/jws2/JWs2Job.js
892 jalview/ws/jws2/JabaParamStore.js
893 jalview/ws/jws2/JabaPreset.js
894 jalview/ws/jws2/JabaWsServerQuery.js
895 jalview/ws/jws2/JabawsCalcWorker.js
896 jalview/ws/jws2/JabawsMsaInterfaceAlignCalcWorker.js
897 jalview/ws/jws2/Jws2Client.js
898 jalview/ws/jws2/Jws2Discoverer.js
899 jalview/ws/jws2/MsaWSClient.js
900 jalview/ws/jws2/MsaWSThread.js
901 jalview/ws/jws2/ParameterUtils.js
902 jalview/ws/jws2/RNAalifoldClient.js
903 jalview/ws/jws2/SequenceAnnotationWSClient.js
904 jalview/ws/jws2/dm/AAConSettings.js
905 jalview/ws/jws2/dm/JabaOption.js
906 jalview/ws/jws2/dm/JabaParameter.js
907 jalview/ws/jws2/dm/JabaValueConstrain.js
908 jalview/ws/jws2/dm/JabaWsParamSet.js
909 jalview/ws/jws2/jabaws2/Jws2Instance.js
910 jalview/ws/jws2/jabaws2/Jws2InstanceFactory.js
911 jalview/ws/params/ArgumentI.js
912 jalview/ws/params/AutoCalcSetting.js
913 jalview/ws/params/InvalidArgumentException.js
914 jalview/ws/params/OptionI.js
915 jalview/ws/params/ParamDatastoreI.js
916 jalview/ws/params/ParamManager.js
917 jalview/ws/params/ParameterI.js
918 jalview/ws/params/ValueConstrainI.js
919 jalview/ws/params/WsParamSetI.js
920 jalview/ws/params/simple/BooleanOption.js
921 jalview/ws/params/simple/IntegerParameter.js
922 jalview/ws/params/simple/Option.js
923 jalview/ws/params/simple/Parameter.js
924 jalview/ws/params/simple/StringChoiceParameter.js
925 jalview/ws/rest/AlignmentProcessor.js
926 jalview/ws/rest/HttpResultSet.js
927 jalview/ws/rest/InputType.js
928 jalview/ws/rest/NoValidInputDataException.js
929 jalview/ws/rest/RestClient.js
930 jalview/ws/rest/RestJob.js
931 jalview/ws/rest/RestJobThread.js
932 jalview/ws/rest/RestServiceDescription.js
933 jalview/ws/rest/params/Alignment.js
934 jalview/ws/rest/params/AnnotationFile.js
935 jalview/ws/rest/params/JobConstant.js
936 jalview/ws/rest/params/SeqGroupIndexVector.js
937 jalview/ws/rest/params/SeqIdVector.js
938 jalview/ws/rest/params/SeqVector.js
939 jalview/ws/rest/params/Tree.js
940 jalview/ws/seqfetcher/ASequenceFetcher.js
941 jalview/ws/seqfetcher/DbSourceProxy.js
942 jalview/ws/seqfetcher/DbSourceProxyImpl.js
943 jalview/ws/sifts/MappingOutputPojo.js
944 jalview/ws/sifts/SiftsClient.js
945 jalview/ws/sifts/SiftsException.js
946 jalview/ws/sifts/SiftsSettings.js
947 jalview/ws/uimodel/AlignAnalysisUIText.js
948 jalview/ws/utils/UrlDownloadClient.js
949 jalview/xml/binding/embl/EntrySetType.js
950 jalview/xml/binding/embl/EntryType.js
951 jalview/xml/binding/embl/ObjectFactory.js
952 jalview/xml/binding/embl/ROOT.js
953 jalview/xml/binding/embl/XrefType.js
954 jalview/xml/binding/jalview/AlcodonFrame.js
955 jalview/xml/binding/jalview/Annotation.js
956 jalview/xml/binding/jalview/AnnotationColourScheme.js
957 jalview/xml/binding/jalview/AnnotationElement.js
958 jalview/xml/binding/jalview/DoubleMatrix.js
959 jalview/xml/binding/jalview/DoubleVector.js
960 jalview/xml/binding/jalview/Feature.js
961 jalview/xml/binding/jalview/FeatureMatcher.js
962 jalview/xml/binding/jalview/FeatureMatcherSet.js
963 jalview/xml/binding/jalview/FilterBy.js
964 jalview/xml/binding/jalview/JalviewModel.js
965 jalview/xml/binding/jalview/JalviewUserColours.js
966 jalview/xml/binding/jalview/MapListType.js
967 jalview/xml/binding/jalview/MapOnAMatrixType.js
968 jalview/xml/binding/jalview/Mapping.js
969 jalview/xml/binding/jalview/MatrixType.js
970 jalview/xml/binding/jalview/NoValueColour.js
971 jalview/xml/binding/jalview/ObjectFactory.js
972 jalview/xml/binding/jalview/PcaDataType.js
973 jalview/xml/binding/jalview/Pdbentry.js
974 jalview/xml/binding/jalview/Property.js
975 jalview/xml/binding/jalview/Sequence.js
976 jalview/xml/binding/jalview/SequenceSet.js
977 jalview/xml/binding/jalview/SequenceType.js
978 jalview/xml/binding/jalview/ThresholdType.js
979 jalview/xml/binding/jalview/VAMSAS.js
980 jalview/xml/binding/jalview/WebServiceParameterSet.js
981 jalview/xml/binding/jalview/package-info.js
982 jalview/xml/binding/sifts/Alignment.js
983 jalview/xml/binding/sifts/EntityType.js
984 jalview/xml/binding/sifts/Entry.js
985 jalview/xml/binding/sifts/ObjectFactory.js
986 jalview/xml/binding/sifts/package-info.js
987 jalview/xml/binding/uniprot/CitationType.js
988 jalview/xml/binding/uniprot/CofactorType.js
989 jalview/xml/binding/uniprot/CommentType.js
990 jalview/xml/binding/uniprot/ConsortiumType.js
991 jalview/xml/binding/uniprot/DbReferenceType.js
992 jalview/xml/binding/uniprot/Entry.js
993 jalview/xml/binding/uniprot/EventType.js
994 jalview/xml/binding/uniprot/EvidenceType.js
995 jalview/xml/binding/uniprot/EvidencedStringType.js
996 jalview/xml/binding/uniprot/FeatureType.js
997 jalview/xml/binding/uniprot/GeneLocationType.js
998 jalview/xml/binding/uniprot/GeneNameType.js
999 jalview/xml/binding/uniprot/GeneType.js
1000 jalview/xml/binding/uniprot/ImportedFromType.js
1001 jalview/xml/binding/uniprot/InteractantType.js
1002 jalview/xml/binding/uniprot/IsoformType.js
1003 jalview/xml/binding/uniprot/KeywordType.js
1004 jalview/xml/binding/uniprot/LocationType.js
1005 jalview/xml/binding/uniprot/MoleculeType.js
1006 jalview/xml/binding/uniprot/NameListType.js
1007 jalview/xml/binding/uniprot/ObjectFactory.js
1008 jalview/xml/binding/uniprot/OrganismNameType.js
1009 jalview/xml/binding/uniprot/OrganismType.js
1010 jalview/xml/binding/uniprot/PersonType.js
1011 jalview/xml/binding/uniprot/PhysiologicalReactionType.js
1012 jalview/xml/binding/uniprot/PositionType.js
1013 jalview/xml/binding/uniprot/PropertyType.js
1014 jalview/xml/binding/uniprot/ProteinExistenceType.js
1015 jalview/xml/binding/uniprot/ProteinType.js
1016 jalview/xml/binding/uniprot/ReactionType.js
1017 jalview/xml/binding/uniprot/ReferenceType.js
1018 jalview/xml/binding/uniprot/SequenceType.js
1019 jalview/xml/binding/uniprot/SourceDataType.js
1020 jalview/xml/binding/uniprot/SourceType.js
1021 jalview/xml/binding/uniprot/StatusType.js
1022 jalview/xml/binding/uniprot/SubcellularLocationType.js
1023 jalview/xml/binding/uniprot/Uniprot.js
1024 jalview/xml/binding/uniprot/package-info.js
1025 java/applet/AppletContext.js
1026 java/applet/AppletStub.js
1027 java/applet/JSApplet.js
1028 java/awt/AWTEvent.js
1029 java/awt/AWTEventMulticaster.js
1030 java/awt/AWTKeyStroke.js
1031 java/awt/ActiveEvent.js
1032 java/awt/Adjustable.js
1033 java/awt/AlphaComposite.js
1034 java/awt/BasicStroke.js
1035 java/awt/BorderLayout.js
1036 java/awt/CardLayout.js
1037 java/awt/Color.js
1038 java/awt/Component.js
1039 java/awt/ComponentOrientation.js
1040 java/awt/Composite.js
1041 java/awt/Container.js
1042 java/awt/ContainerOrderFocusTraversalPolicy.js
1043 java/awt/Cursor.js
1044 java/awt/DefaultFocusTraversalPolicy.js
1045 java/awt/DefaultKeyboardFocusManager.js
1046 java/awt/Dimension.js
1047 java/awt/EventDispatchThread.js
1048 java/awt/EventFilter.js
1049 java/awt/EventQueue.js
1050 java/awt/EventQueueItem.js
1051 java/awt/FlowLayout.js
1052 java/awt/FocusTraversalPolicy.js
1053 java/awt/Font.js
1054 java/awt/FontMetrics.js
1055 java/awt/Graphics.js
1056 java/awt/Graphics2D.js
1057 java/awt/GraphicsCallback.js
1058 java/awt/GraphicsConfiguration.js
1059 java/awt/GraphicsDevice.js
1060 java/awt/GraphicsEnvironment.js
1061 java/awt/GridBagConstraints.js
1062 java/awt/GridBagLayout.js
1063 java/awt/GridBagLayoutInfo.js
1064 java/awt/GridLayout.js
1065 java/awt/Image.js
1066 java/awt/Insets.js
1067 java/awt/ItemSelectable.js
1068 java/awt/JSComponent.js
1069 java/awt/JSDialog.js
1070 java/awt/JSFrame.js
1071 java/awt/JSPanel.js
1072 java/awt/KeyEventDispatcher.js
1073 java/awt/KeyEventPostProcessor.js
1074 java/awt/KeyboardFocusManager.js
1075 java/awt/LayoutManager.js
1076 java/awt/LayoutManager2.js
1077 java/awt/LightweightDispatcher.js
1078 java/awt/Paint.js
1079 java/awt/Point.js
1080 java/awt/Queue.js
1081 java/awt/Rectangle.js
1082 java/awt/RenderingHints.js
1083 java/awt/SentEvent.js
1084 java/awt/Shape.js
1085 java/awt/Stroke.js
1086 java/awt/Taskbar.js
1087 java/awt/TextComponent.js
1088 java/awt/Toolkit.js
1089 java/awt/Transparency.js
1090 java/awt/VKCollection.js
1091 java/awt/Window.js
1092 java/awt/color/ColorSpace.js
1093 java/awt/datatransfer/ClipboardOwner.js
1094 java/awt/datatransfer/FlavorMap.js
1095 java/awt/datatransfer/FlavorTable.js
1096 java/awt/datatransfer/SystemFlavorMap.js
1097 java/awt/dnd/DropTarget.js
1098 java/awt/dnd/DropTargetContext.js
1099 java/awt/dnd/DropTargetListener.js
1100 java/awt/dnd/peer/DropTargetPeer.js
1101 java/awt/event/AWTEventListener.js
1102 java/awt/event/ActionEvent.js
1103 java/awt/event/ActionListener.js
1104 java/awt/event/AdjustmentEvent.js
1105 java/awt/event/AdjustmentListener.js
1106 java/awt/event/ComponentAdapter.js
1107 java/awt/event/ComponentEvent.js
1108 java/awt/event/ComponentListener.js
1109 java/awt/event/ContainerEvent.js
1110 java/awt/event/ContainerListener.js
1111 java/awt/event/FocusAdapter.js
1112 java/awt/event/FocusEvent.js
1113 java/awt/event/FocusListener.js
1114 java/awt/event/HierarchyBoundsListener.js
1115 java/awt/event/HierarchyListener.js
1116 java/awt/event/InputEvent.js
1117 java/awt/event/InputMethodListener.js
1118 java/awt/event/InvocationEvent.js
1119 java/awt/event/ItemEvent.js
1120 java/awt/event/ItemListener.js
1121 java/awt/event/KeyAdapter.js
1122 java/awt/event/KeyEvent.js
1123 java/awt/event/KeyListener.js
1124 java/awt/event/MouseAdapter.js
1125 java/awt/event/MouseEvent.js
1126 java/awt/event/MouseListener.js
1127 java/awt/event/MouseMotionAdapter.js
1128 java/awt/event/MouseMotionListener.js
1129 java/awt/event/MouseWheelEvent.js
1130 java/awt/event/MouseWheelListener.js
1131 java/awt/event/TextListener.js
1132 java/awt/event/WindowAdapter.js
1133 java/awt/event/WindowEvent.js
1134 java/awt/event/WindowFocusListener.js
1135 java/awt/event/WindowListener.js
1136 java/awt/event/WindowStateListener.js
1137 java/awt/font/FontRenderContext.js
1138 java/awt/font/TextAttribute.js
1139 java/awt/geom/AffineTransform.js
1140 java/awt/geom/Dimension2D.js
1141 java/awt/geom/Path2D.js
1142 java/awt/geom/PathIterator.js
1143 java/awt/geom/Point2D.js
1144 java/awt/geom/RectIterator.js
1145 java/awt/geom/Rectangle2D.js
1146 java/awt/geom/RectangularShape.js
1147 java/awt/image/BufferedImage.js
1148 java/awt/image/ColorModel.js
1149 java/awt/image/DataBuffer.js
1150 java/awt/image/DataBufferInt.js
1151 java/awt/image/DirectColorModel.js
1152 java/awt/image/ImageConsumer.js
1153 java/awt/image/ImageObserver.js
1154 java/awt/image/PackedColorModel.js
1155 java/awt/image/Raster.js
1156 java/awt/image/RenderedImage.js
1157 java/awt/image/SampleModel.js
1158 java/awt/image/SinglePixelPackedSampleModel.js
1159 java/awt/image/WritableRaster.js
1160 java/awt/peer/ComponentPeer.js
1161 java/awt/peer/ContainerPeer.js
1162 java/awt/peer/FramePeer.js
1163 java/awt/peer/KeyboardFocusManagerPeer.js
1164 java/awt/peer/LightweightPeer.js
1165 java/awt/peer/WindowPeer.js
1166 java/awt/print/Printable.js
1167 java/beans/ChangeListenerMap.js
1168 java/beans/PropertyChangeEvent.js
1169 java/beans/PropertyChangeListener.js
1170 java/beans/PropertyChangeSupport.js
1171 java/io/BufferedInputStream.js
1172 java/io/BufferedWriter.js
1173 java/io/DataInput.js
1174 java/io/DataInputStream.js
1175 java/io/File.js
1176 java/io/FileOutputStream.js
1177 java/io/FileReader.js
1178 java/io/FileSystem.js
1179 java/io/FilenameFilter.js
1180 java/io/FilterInputStream.js
1181 java/io/FilterOutputStream.js
1182 java/io/InputStream.js
1183 java/io/InputStreamReader.js
1184 java/io/ObjectStreamField.js
1185 java/io/OutputStreamWriter.js
1186 java/io/PrintStream.js
1187 java/io/StringWriter.js
1188 java/io/Writer.js
1189 java/lang/AbstractStringBuilder.js
1190 java/lang/ApplicationShutdownHooks.js
1191 java/lang/Class.js
1192 java/lang/Enum.js
1193 java/lang/Iterable.js
1194 java/lang/Runtime.js
1195 java/lang/Shutdown.js
1196 java/lang/StringBuffer.js
1197 java/lang/StringBuilder.js
1198 java/lang/Thread.js
1199 java/lang/ThreadGroup.js
1200 java/lang/ThreadLocal.js
1201 java/lang/ref/ReferenceQueue.js
1202 java/lang/reflect/AccessibleObject.js
1203 java/lang/reflect/AnnotatedElement.js
1204 java/lang/reflect/Constructor.js
1205 java/lang/reflect/Method.js
1206 java/math/BigDecimal.js
1207 java/math/BigInteger.js
1208 java/math/MathContext.js
1209 java/net/ContentHandler.js
1210 java/net/HttpURLConnection.js
1211 java/net/URI.js
1212 java/net/URL.js
1213 java/net/URLConnection.js
1214 java/net/URLEncoder.js
1215 java/net/URLStreamHandler.js
1216 java/net/URLStreamHandlerFactory.js
1217 java/net/UnknownHostException.js
1218 java/nio/file/FileSystem.js
1219 java/nio/file/FileSystems.js
1220 java/nio/file/Path.js
1221 java/nio/file/Watchable.js
1222 java/nio/file/spi/FileSystemProvider.js
1223 java/security/AccessController.js
1224 java/security/PrivilegedAction.js
1225 java/security/PrivilegedExceptionAction.js
1226 java/text/CharacterIterator.js
1227 java/text/DateFormat.js
1228 java/text/DateFormatSymbols.js
1229 java/text/MessageFormat.js
1230 java/text/SimpleDateFormat.js
1231 java/text/spi/BreakIteratorProvider.js
1232 java/text/spi/CollatorProvider.js
1233 java/text/spi/DateFormatProvider.js
1234 java/text/spi/DateFormatSymbolsProvider.js
1235 java/text/spi/DecimalFormatSymbolsProvider.js
1236 java/text/spi/NumberFormatProvider.js
1237 java/util/AbstractCollection.js
1238 java/util/AbstractList.js
1239 java/util/AbstractMap.js
1240 java/util/AbstractQueue.js
1241 java/util/AbstractSequentialList.js
1242 java/util/AbstractSet.js
1243 java/util/ArrayDeque.js
1244 java/util/ArrayList.js
1245 java/util/Arrays.js
1246 java/util/BitSet.js
1247 java/util/Calendar.js
1248 java/util/Collection.js
1249 java/util/Collections.js
1250 java/util/Comparator.js
1251 java/util/Deque.js
1252 java/util/Dictionary.js
1253 java/util/EnumMap.js
1254 java/util/EnumSet.js
1255 java/util/Enumeration.js
1256 java/util/EventListener.js
1257 java/util/EventObject.js
1258 java/util/Formatter.js
1259 java/util/GregorianCalendar.js
1260 java/util/HashMap.js
1261 java/util/HashSet.js
1262 java/util/Hashtable.js
1263 java/util/IdentityHashMap.js
1264 java/util/Iterator.js
1265 java/util/JumboEnumSet.js
1266 java/util/LinkedHashMap.js
1267 java/util/LinkedHashSet.js
1268 java/util/LinkedList.js
1269 java/util/List.js
1270 java/util/ListIterator.js
1271 java/util/Locale.js
1272 java/util/Map.js
1273 java/util/NavigableMap.js
1274 java/util/NavigableSet.js
1275 java/util/Objects.js
1276 java/util/Properties.js
1277 java/util/PropertyResourceBundle.js
1278 java/util/Queue.js
1279 java/util/Random.js
1280 java/util/RandomAccess.js
1281 java/util/RegularEnumSet.js
1282 java/util/ServiceLoader.js
1283 java/util/Set.js
1284 java/util/SortedMap.js
1285 java/util/SortedSet.js
1286 java/util/Spliterator.js
1287 java/util/StringTokenizer.js
1288 java/util/TimSort.js
1289 java/util/TimeZone.js
1290 java/util/TreeMap.js
1291 java/util/TreeSet.js
1292 java/util/Vector.js
1293 java/util/WeakHashMap.js
1294 java/util/concurrent/AbstractExecutorService.js
1295 java/util/concurrent/BlockingQueue.js
1296 java/util/concurrent/Callable.js
1297 java/util/concurrent/Executor.js
1298 java/util/concurrent/ExecutorService.js
1299 java/util/concurrent/Executors.js
1300 java/util/concurrent/Future.js
1301 java/util/concurrent/FutureTask.js
1302 java/util/concurrent/LinkedBlockingQueue.js
1303 java/util/concurrent/RejectedExecutionHandler.js
1304 java/util/concurrent/RunnableFuture.js
1305 java/util/concurrent/Semaphore.js
1306 java/util/concurrent/ThreadFactory.js
1307 java/util/concurrent/ThreadPoolExecutor.js
1308 java/util/concurrent/TimeUnit.js
1309 java/util/concurrent/locks/AbstractOwnableSynchronizer.js
1310 java/util/concurrent/locks/AbstractQueuedSynchronizer.js
1311 java/util/concurrent/locks/Condition.js
1312 java/util/concurrent/locks/Lock.js
1313 java/util/concurrent/locks/ReadWriteLock.js
1314 java/util/concurrent/locks/ReentrantLock.js
1315 java/util/concurrent/locks/ReentrantReadWriteLock.js
1316 java/util/function/BiConsumer.js
1317 java/util/function/BiFunction.js
1318 java/util/function/BinaryOperator.js
1319 java/util/function/Consumer.js
1320 java/util/function/Function.js
1321 java/util/function/Supplier.js
1322 java/util/jar/JarEntry.js
1323 java/util/jar/JarInputStream.js
1324 java/util/regex/Pattern.js
1325 java/util/spi/CalendarDataProvider.js
1326 java/util/spi/CurrencyNameProvider.js
1327 java/util/spi/LocaleNameProvider.js
1328 java/util/spi/TimeZoneNameProvider.js
1329 java/util/stream/AbstractPipeline.js
1330 java/util/stream/BaseStream.js
1331 java/util/stream/Collector.js
1332 java/util/stream/Collectors.js
1333 java/util/stream/PipelineHelper.js
1334 java/util/stream/ReduceOps.js
1335 java/util/stream/ReferencePipeline.js
1336 java/util/stream/Sink.js
1337 java/util/stream/Stream.js
1338 java/util/stream/StreamOpFlag.js
1339 java/util/stream/StreamShape.js
1340 java/util/stream/StreamSupport.js
1341 java/util/stream/TerminalOp.js
1342 java/util/stream/TerminalSink.js
1343 java/util/zip/CRC32.js
1344 java/util/zip/Inflater.js
1345 java/util/zip/InflaterInputStream.js
1346 java/util/zip/ZipConstants.js
1347 java/util/zip/ZipEntry.js
1348 java/util/zip/ZipInputStream.js
1349 javajs/api/BytePoster.js
1350 javajs/api/GenericCifDataParser.js
1351 javajs/api/GenericLineReader.js
1352 javajs/api/GenericOutputChannel.js
1353 javajs/api/JSONEncodable.js
1354 javajs/async/SwingJSUtils.js
1355 javajs/util/A4d.js
1356 javajs/util/AjaxURLConnection.js
1357 javajs/util/AjaxURLStreamHandler.js
1358 javajs/util/AjaxURLStreamHandlerFactory.js
1359 javajs/util/BS.js
1360 javajs/util/Base64.js
1361 javajs/util/CU.js
1362 javajs/util/CifDataParser.js
1363 javajs/util/DF.js
1364 javajs/util/Encoding.js
1365 javajs/util/JSThread.js
1366 javajs/util/LimitedLineReader.js
1367 javajs/util/Lst.js
1368 javajs/util/M3.js
1369 javajs/util/M34.js
1370 javajs/util/M34d.js
1371 javajs/util/M3d.js
1372 javajs/util/M4d.js
1373 javajs/util/OC.js
1374 javajs/util/P3d.js
1375 javajs/util/P3i.js
1376 javajs/util/P4d.js
1377 javajs/util/PT.js
1378 javajs/util/Rdr.js
1379 javajs/util/SB.js
1380 javajs/util/T3d.js
1381 javajs/util/T3i.js
1382 javajs/util/T4d.js
1383 javajs/util/V3d.js
1384 javax/net/ssl/HttpsURLConnection.js
1385 javax/swing/AbstractAction.js
1386 javax/swing/AbstractButton.js
1387 javax/swing/AbstractListModel.js
1388 javax/swing/Action.js
1389 javax/swing/ActionMap.js
1390 javax/swing/AncestorNotifier.js
1391 javax/swing/ArrayTable.js
1392 javax/swing/Autoscroller.js
1393 javax/swing/BorderFactory.js
1394 javax/swing/BoundedRangeModel.js
1395 javax/swing/BoxLayout.js
1396 javax/swing/ButtonGroup.js
1397 javax/swing/ButtonModel.js
1398 javax/swing/CellRendererPane.js
1399 javax/swing/ClientPropertyKey.js
1400 javax/swing/ComboBoxEditor.js
1401 javax/swing/ComboBoxModel.js
1402 javax/swing/ComponentInputMap.js
1403 javax/swing/DefaultBoundedRangeModel.js
1404 javax/swing/DefaultButtonModel.js
1405 javax/swing/DefaultComboBoxModel.js
1406 javax/swing/DefaultDesktopManager.js
1407 javax/swing/DefaultListCellRenderer.js
1408 javax/swing/DefaultListSelectionModel.js
1409 javax/swing/DefaultRowSorter.js
1410 javax/swing/DefaultSingleSelectionModel.js
1411 javax/swing/DesktopManager.js
1412 javax/swing/DropMode.js
1413 javax/swing/FocusManager.js
1414 javax/swing/Icon.js
1415 javax/swing/ImageIcon.js
1416 javax/swing/InputMap.js
1417 javax/swing/InternalFrameFocusTraversalPolicy.js
1418 javax/swing/JApplet.js
1419 javax/swing/JButton.js
1420 javax/swing/JCheckBox.js
1421 javax/swing/JCheckBoxMenuItem.js
1422 javax/swing/JComboBox.js
1423 javax/swing/JComponent.js
1424 javax/swing/JDesktopPane.js
1425 javax/swing/JDialog.js
1426 javax/swing/JFileChooser.js
1427 javax/swing/JFrame.js
1428 javax/swing/JInternalFrame.js
1429 javax/swing/JLabel.js
1430 javax/swing/JLayeredPane.js
1431 javax/swing/JList.js
1432 javax/swing/JMenu.js
1433 javax/swing/JMenuBar.js
1434 javax/swing/JMenuItem.js
1435 javax/swing/JOptionPane.js
1436 javax/swing/JPanel.js
1437 javax/swing/JPopupMenu.js
1438 javax/swing/JProgressBar.js
1439 javax/swing/JRadioButtonMenuItem.js
1440 javax/swing/JRootPane.js
1441 javax/swing/JScrollBar.js
1442 javax/swing/JScrollPane.js
1443 javax/swing/JSeparator.js
1444 javax/swing/JTabbedPane.js
1445 javax/swing/JTable.js
1446 javax/swing/JTextArea.js
1447 javax/swing/JTextField.js
1448 javax/swing/JToggleButton.js
1449 javax/swing/JToolTip.js
1450 javax/swing/JViewport.js
1451 javax/swing/JWindow.js
1452 javax/swing/KeyStroke.js
1453 javax/swing/KeyboardManager.js
1454 javax/swing/LayoutComparator.js
1455 javax/swing/LayoutFocusTraversalPolicy.js
1456 javax/swing/ListCellRenderer.js
1457 javax/swing/ListModel.js
1458 javax/swing/ListSelectionModel.js
1459 javax/swing/LookAndFeel.js
1460 javax/swing/MenuElement.js
1461 javax/swing/MenuSelectionManager.js
1462 javax/swing/MutableComboBoxModel.js
1463 javax/swing/Popup.js
1464 javax/swing/PopupFactory.js
1465 javax/swing/RepaintManager.js
1466 javax/swing/RootPaneContainer.js
1467 javax/swing/RowSorter.js
1468 javax/swing/ScrollPaneConstants.js
1469 javax/swing/ScrollPaneLayout.js
1470 javax/swing/Scrollable.js
1471 javax/swing/SingleSelectionModel.js
1472 javax/swing/SizeRequirements.js
1473 javax/swing/SortOrder.js
1474 javax/swing/SortingFocusTraversalPolicy.js
1475 javax/swing/Spring.js
1476 javax/swing/SpringLayout.js
1477 javax/swing/SwingConstants.js
1478 javax/swing/SwingContainerOrderFocusTraversalPolicy.js
1479 javax/swing/SwingDefaultFocusTraversalPolicy.js
1480 javax/swing/SwingPaintEventDispatcher.js
1481 javax/swing/SwingUtilities.js
1482 javax/swing/Timer.js
1483 javax/swing/ToolTipManager.js
1484 javax/swing/TransferHandler.js
1485 javax/swing/UIDefaults.js
1486 javax/swing/UIManager.js
1487 javax/swing/ViewportLayout.js
1488 javax/swing/WindowConstants.js
1489 javax/swing/border/AbstractBorder.js
1490 javax/swing/border/BevelBorder.js
1491 javax/swing/border/Border.js
1492 javax/swing/border/CompoundBorder.js
1493 javax/swing/border/EmptyBorder.js
1494 javax/swing/border/EtchedBorder.js
1495 javax/swing/border/LineBorder.js
1496 javax/swing/border/TitledBorder.js
1497 javax/swing/event/AncestorEvent.js
1498 javax/swing/event/AncestorListener.js
1499 javax/swing/event/CaretEvent.js
1500 javax/swing/event/CaretListener.js
1501 javax/swing/event/CellEditorListener.js
1502 javax/swing/event/ChangeEvent.js
1503 javax/swing/event/ChangeListener.js
1504 javax/swing/event/DocumentEvent.js
1505 javax/swing/event/DocumentListener.js
1506 javax/swing/event/EventListenerList.js
1507 javax/swing/event/HyperlinkListener.js
1508 javax/swing/event/InternalFrameAdapter.js
1509 javax/swing/event/InternalFrameEvent.js
1510 javax/swing/event/InternalFrameListener.js
1511 javax/swing/event/ListDataEvent.js
1512 javax/swing/event/ListDataListener.js
1513 javax/swing/event/ListSelectionEvent.js
1514 javax/swing/event/ListSelectionListener.js
1515 javax/swing/event/MenuEvent.js
1516 javax/swing/event/MenuKeyListener.js
1517 javax/swing/event/MenuListener.js
1518 javax/swing/event/MouseInputListener.js
1519 javax/swing/event/RowSorterEvent.js
1520 javax/swing/event/RowSorterListener.js
1521 javax/swing/event/SwingPropertyChangeSupport.js
1522 javax/swing/event/TableColumnModelEvent.js
1523 javax/swing/event/TableColumnModelListener.js
1524 javax/swing/event/TableModelEvent.js
1525 javax/swing/event/TableModelListener.js
1526 javax/swing/event/UndoableEditEvent.js
1527 javax/swing/event/UndoableEditListener.js
1528 javax/swing/filechooser/FileFilter.js
1529 javax/swing/filechooser/FileView.js
1530 javax/swing/plaf/ActionMapUIResource.js
1531 javax/swing/plaf/BorderUIResource.js
1532 javax/swing/plaf/ColorUIResource.js
1533 javax/swing/plaf/ComponentInputMapUIResource.js
1534 javax/swing/plaf/ComponentUI.js
1535 javax/swing/plaf/DimensionUIResource.js
1536 javax/swing/plaf/FontUIResource.js
1537 javax/swing/plaf/InputMapUIResource.js
1538 javax/swing/plaf/InsetsUIResource.js
1539 javax/swing/plaf/UIResource.js
1540 javax/swing/plaf/basic/BasicBorders.js
1541 javax/swing/plaf/basic/BasicGraphicsUtils.js
1542 javax/swing/table/AbstractTableModel.js
1543 javax/swing/table/DefaultTableCellRenderer.js
1544 javax/swing/table/DefaultTableColumnModel.js
1545 javax/swing/table/DefaultTableModel.js
1546 javax/swing/table/JTableHeader.js
1547 javax/swing/table/TableCellRenderer.js
1548 javax/swing/table/TableColumn.js
1549 javax/swing/table/TableColumnModel.js
1550 javax/swing/table/TableModel.js
1551 javax/swing/table/TableRowSorter.js
1552 javax/swing/text/AbstractDocument.js
1553 javax/swing/text/AttributeSet.js
1554 javax/swing/text/BoxView.js
1555 javax/swing/text/Caret.js
1556 javax/swing/text/CompositeView.js
1557 javax/swing/text/DefaultCaret.js
1558 javax/swing/text/DefaultEditorKit.js
1559 javax/swing/text/Document.js
1560 javax/swing/text/EditorKit.js
1561 javax/swing/text/Element.js
1562 javax/swing/text/GapContent.js
1563 javax/swing/text/GapVector.js
1564 javax/swing/text/JTextComponent.js
1565 javax/swing/text/MutableAttributeSet.js
1566 javax/swing/text/PlainDocument.js
1567 javax/swing/text/PlainView.js
1568 javax/swing/text/Position.js
1569 javax/swing/text/Segment.js
1570 javax/swing/text/SegmentCache.js
1571 javax/swing/text/SimpleAttributeSet.js
1572 javax/swing/text/Style.js
1573 javax/swing/text/StyleConstants.js
1574 javax/swing/text/StyleContext.js
1575 javax/swing/text/TabExpander.js
1576 javax/swing/text/TextAction.js
1577 javax/swing/text/Utilities.js
1578 javax/swing/text/View.js
1579 javax/swing/text/WrappedPlainView.js
1580 javax/swing/tree/TreeNode.js
1581 javax/swing/undo/AbstractUndoableEdit.js
1582 javax/swing/undo/CompoundEdit.js
1583 javax/swing/undo/UndoableEdit.js
1584 javax/xml/bind/ContextFinder.js
1585 javax/xml/bind/GetPropertyAction.js
1586 javax/xml/bind/JAXBContext.js
1587 javax/xml/bind/JAXBContextFactory.js
1588 javax/xml/bind/JAXBElement.js
1589 javax/xml/bind/ModuleUtil.js
1590 javax/xml/bind/ServiceLoaderUtil.js
1591 javax/xml/bind/Unmarshaller.js
1592 javax/xml/bind/ValidationEventHandler.js
1593 javax/xml/bind/annotation/adapters/CollapsedStringAdapter.js
1594 javax/xml/bind/annotation/adapters/XmlAdapter.js
1595 javax/xml/bind/helpers/AbstractUnmarshallerImpl.js
1596 javax/xml/bind/helpers/DefaultValidationEventHandler.js
1597 javax/xml/datatype/XMLGregorianCalendar.js
1598 javax/xml/namespace/QName.js
1599 javax/xml/stream/XMLInputFactory.js
1600 javax/xml/stream/XMLStreamConstants.js
1601 javax/xml/stream/XMLStreamReader.js
1602 mc_view/AppletPDBCanvas.js
1603 mc_view/AppletPDBViewer.js
1604 mc_view/Atom.js
1605 mc_view/Bond.js
1606 mc_view/MCMatrix.js
1607 mc_view/PDBCanvas.js
1608 mc_view/PDBChain.js
1609 mc_view/PDBfile.js
1610 mc_view/Residue.js
1611 mc_view/Zsort.js
1612 net/miginfocom/layout/AC.js
1613 net/miginfocom/layout/AnimSpec.js
1614 net/miginfocom/layout/BoundSize.js
1615 net/miginfocom/layout/CC.js
1616 net/miginfocom/layout/ComponentWrapper.js
1617 net/miginfocom/layout/ConstraintParser.js
1618 net/miginfocom/layout/ContainerWrapper.js
1619 net/miginfocom/layout/DimConstraint.js
1620 net/miginfocom/layout/Grid.js
1621 net/miginfocom/layout/LC.js
1622 net/miginfocom/layout/LayoutUtil.js
1623 net/miginfocom/layout/LinkHandler.js
1624 net/miginfocom/layout/PlatformDefaults.js
1625 net/miginfocom/layout/ResizeConstraint.js
1626 net/miginfocom/layout/UnitValue.js
1627 net/miginfocom/swing/MigLayout.js
1628 net/miginfocom/swing/SwingComponentWrapper.js
1629 net/miginfocom/swing/SwingContainerWrapper.js
1630 org/apache/xerces/jaxp/datatype/XMLGregorianCalendarImpl.js
1631 org/jibble/epsgraphics/EpsDocument.js
1632 org/jibble/epsgraphics/EpsException.js
1633 org/jibble/epsgraphics/EpsGraphics2D.js
1634 org/jmol/adapter/readers/cif/CifReader.js
1635 org/jmol/adapter/readers/cif/MMCifReader.js
1636 org/jmol/adapter/readers/pdb/PdbReader.js
1637 org/jmol/adapter/smarter/Atom.js
1638 org/jmol/adapter/smarter/AtomIterator.js
1639 org/jmol/adapter/smarter/AtomSetCollection.js
1640 org/jmol/adapter/smarter/AtomSetCollectionReader.js
1641 org/jmol/adapter/smarter/AtomSetObject.js
1642 org/jmol/adapter/smarter/Bond.js
1643 org/jmol/adapter/smarter/Resolver.js
1644 org/jmol/adapter/smarter/SmarterJmolAdapter.js
1645 org/jmol/adapter/smarter/Structure.js
1646 org/jmol/adapter/smarter/StructureIterator.js
1647 org/jmol/api/AtomIndexIterator.js
1648 org/jmol/api/EventManager.js
1649 org/jmol/api/FontManager.js
1650 org/jmol/api/GenericFileInterface.js
1651 org/jmol/api/GenericMouseInterface.js
1652 org/jmol/api/GenericPlatform.js
1653 org/jmol/api/Interface.js
1654 org/jmol/api/JmolAdapter.js
1655 org/jmol/api/JmolAdapterAtomIterator.js
1656 org/jmol/api/JmolAdapterStructureIterator.js
1657 org/jmol/api/JmolCallbackListener.js
1658 org/jmol/api/JmolGraphicsInterface.js
1659 org/jmol/api/JmolMeasurementClient.js
1660 org/jmol/api/JmolRendererInterface.js
1661 org/jmol/api/JmolRepaintManager.js
1662 org/jmol/api/JmolScriptEvaluator.js
1663 org/jmol/api/JmolScriptFunction.js
1664 org/jmol/api/JmolScriptManager.js
1665 org/jmol/api/JmolSelectionListener.js
1666 org/jmol/api/JmolStatusListener.js
1667 org/jmol/api/JmolViewer.js
1668 org/jmol/api/PlatformViewer.js
1669 org/jmol/api/SymmetryInterface.js
1670 org/jmol/api/Translator.js
1671 org/jmol/atomdata/AtomDataServer.js
1672 org/jmol/atomdata/RadiusData.js
1673 org/jmol/awt/AwtFile.js
1674 org/jmol/awt/AwtFont.js
1675 org/jmol/awt/Display.js
1676 org/jmol/awt/Image.js
1677 org/jmol/awt/Mouse.js
1678 org/jmol/awt/Platform.js
1679 org/jmol/bspt/Bspf.js
1680 org/jmol/bspt/Bspt.js
1681 org/jmol/bspt/CubeIterator.js
1682 org/jmol/bspt/Element.js
1683 org/jmol/bspt/Leaf.js
1684 org/jmol/bspt/Node.js
1685 org/jmol/c/CBK.js
1686 org/jmol/c/FIL.js
1687 org/jmol/c/PAL.js
1688 org/jmol/c/STER.js
1689 org/jmol/c/STR.js
1690 org/jmol/c/VDW.js
1691 org/jmol/dssx/Bridge.js
1692 org/jmol/dssx/DSSP.js
1693 org/jmol/g3d/CylinderRenderer.js
1694 org/jmol/g3d/G3DRenderer.js
1695 org/jmol/g3d/Graphics3D.js
1696 org/jmol/g3d/HermiteRenderer.js
1697 org/jmol/g3d/LineRenderer.js
1698 org/jmol/g3d/Pixelator.js
1699 org/jmol/g3d/Platform3D.js
1700 org/jmol/g3d/PrecisionRenderer.js
1701 org/jmol/g3d/SphereRenderer.js
1702 org/jmol/g3d/TextRenderer.js
1703 org/jmol/g3d/TextString.js
1704 org/jmol/g3d/TriangleRenderer.js
1705 org/jmol/i18n/GT.js
1706 org/jmol/i18n/Language.js
1707 org/jmol/i18n/Resource.js
1708 org/jmol/io/FileReader.js
1709 org/jmol/modelset/Atom.js
1710 org/jmol/modelset/AtomCollection.js
1711 org/jmol/modelset/AtomIteratorWithinModel.js
1712 org/jmol/modelset/Bond.js
1713 org/jmol/modelset/BondCollection.js
1714 org/jmol/modelset/BondIterator.js
1715 org/jmol/modelset/BondIteratorSelected.js
1716 org/jmol/modelset/Chain.js
1717 org/jmol/modelset/Group.js
1718 org/jmol/modelset/HBond.js
1719 org/jmol/modelset/LabelToken.js
1720 org/jmol/modelset/Measurement.js
1721 org/jmol/modelset/MeasurementData.js
1722 org/jmol/modelset/MeasurementPending.js
1723 org/jmol/modelset/Model.js
1724 org/jmol/modelset/ModelLoader.js
1725 org/jmol/modelset/ModelSet.js
1726 org/jmol/modelset/Orientation.js
1727 org/jmol/modelset/Structure.js
1728 org/jmol/modelset/Text.js
1729 org/jmol/modelset/TickInfo.js
1730 org/jmol/modelsetbio/AlphaMonomer.js
1731 org/jmol/modelsetbio/AlphaPolymer.js
1732 org/jmol/modelsetbio/AminoMonomer.js
1733 org/jmol/modelsetbio/AminoPolymer.js
1734 org/jmol/modelsetbio/BioModel.js
1735 org/jmol/modelsetbio/BioModelSet.js
1736 org/jmol/modelsetbio/BioPolymer.js
1737 org/jmol/modelsetbio/BioResolver.js
1738 org/jmol/modelsetbio/Helix.js
1739 org/jmol/modelsetbio/Monomer.js
1740 org/jmol/modelsetbio/ProteinStructure.js
1741 org/jmol/modelsetbio/Sheet.js
1742 org/jmol/modelsetbio/Turn.js
1743 org/jmol/render/BallsRenderer.js
1744 org/jmol/render/BbcageRenderer.js
1745 org/jmol/render/CageRenderer.js
1746 org/jmol/render/FontLineShapeRenderer.js
1747 org/jmol/render/FrankRenderer.js
1748 org/jmol/render/HoverRenderer.js
1749 org/jmol/render/LabelsRenderer.js
1750 org/jmol/render/MeasuresRenderer.js
1751 org/jmol/render/RepaintManager.js
1752 org/jmol/render/ShapeRenderer.js
1753 org/jmol/render/SticksRenderer.js
1754 org/jmol/render/TextRenderer.js
1755 org/jmol/render/UccageRenderer.js
1756 org/jmol/renderbio/BioShapeRenderer.js
1757 org/jmol/renderbio/CartoonRenderer.js
1758 org/jmol/renderbio/RocketsRenderer.js
1759 org/jmol/renderbio/StrandsRenderer.js
1760 org/jmol/script/ContextToken.js
1761 org/jmol/script/SV.js
1762 org/jmol/script/ScriptCompiler.js
1763 org/jmol/script/ScriptContext.js
1764 org/jmol/script/ScriptError.js
1765 org/jmol/script/ScriptEval.js
1766 org/jmol/script/ScriptExpr.js
1767 org/jmol/script/ScriptFlowContext.js
1768 org/jmol/script/ScriptFunction.js
1769 org/jmol/script/ScriptManager.js
1770 org/jmol/script/ScriptMathProcessor.js
1771 org/jmol/script/ScriptParam.js
1772 org/jmol/script/ScriptQueueThread.js
1773 org/jmol/script/ScriptTokenParser.js
1774 org/jmol/script/T.js
1775 org/jmol/scriptext/CmdExt.js
1776 org/jmol/scriptext/MathExt.js
1777 org/jmol/scriptext/ScriptExt.js
1778 org/jmol/shape/AtomShape.js
1779 org/jmol/shape/Balls.js
1780 org/jmol/shape/Bbcage.js
1781 org/jmol/shape/Echo.js
1782 org/jmol/shape/FontLineShape.js
1783 org/jmol/shape/Frank.js
1784 org/jmol/shape/Hover.js
1785 org/jmol/shape/Labels.js
1786 org/jmol/shape/Measures.js
1787 org/jmol/shape/Mesh.js
1788 org/jmol/shape/Shape.js
1789 org/jmol/shape/Sticks.js
1790 org/jmol/shape/TextShape.js
1791 org/jmol/shape/Uccage.js
1792 org/jmol/shapebio/BioShape.js
1793 org/jmol/shapebio/BioShapeCollection.js
1794 org/jmol/shapebio/Cartoon.js
1795 org/jmol/shapebio/Rockets.js
1796 org/jmol/symmetry/Symmetry.js
1797 org/jmol/symmetry/SymmetryInfo.js
1798 org/jmol/symmetry/UnitCell.js
1799 org/jmol/thread/HoverWatcherThread.js
1800 org/jmol/thread/JmolThread.js
1801 org/jmol/thread/TimeoutThread.js
1802 org/jmol/util/BSUtil.js
1803 org/jmol/util/BoxInfo.js
1804 org/jmol/util/C.js
1805 org/jmol/util/ColorEncoder.js
1806 org/jmol/util/CommandHistory.js
1807 org/jmol/util/DefaultLogger.js
1808 org/jmol/util/Edge.js
1809 org/jmol/util/Elements.js
1810 org/jmol/util/Escape.js
1811 org/jmol/util/Font.js
1812 org/jmol/util/GData.js
1813 org/jmol/util/Geodesic.js
1814 org/jmol/util/Int2IntHash.js
1815 org/jmol/util/Int2IntHashEntry.js
1816 org/jmol/util/Logger.js
1817 org/jmol/util/LoggerInterface.js
1818 org/jmol/util/MeshSurface.js
1819 org/jmol/util/Node.js
1820 org/jmol/util/Normix.js
1821 org/jmol/util/Point3fi.js
1822 org/jmol/util/Rectangle.js
1823 org/jmol/util/Rgb16.js
1824 org/jmol/util/Shader.js
1825 org/jmol/util/SimpleEdge.js
1826 org/jmol/util/SimpleNode.js
1827 org/jmol/util/SimpleUnitCell.js
1828 org/jmol/util/TempArray.js
1829 org/jmol/viewer/ActionManager.js
1830 org/jmol/viewer/AnimationManager.js
1831 org/jmol/viewer/ColorManager.js
1832 org/jmol/viewer/FileManager.js
1833 org/jmol/viewer/Gesture.js
1834 org/jmol/viewer/GlobalSettings.js
1835 org/jmol/viewer/JC.js
1836 org/jmol/viewer/JmolStateCreator.js
1837 org/jmol/viewer/ModelManager.js
1838 org/jmol/viewer/MotionPoint.js
1839 org/jmol/viewer/MouseState.js
1840 org/jmol/viewer/SelectionManager.js
1841 org/jmol/viewer/ShapeManager.js
1842 org/jmol/viewer/StateCreator.js
1843 org/jmol/viewer/StateManager.js
1844 org/jmol/viewer/StatusManager.js
1845 org/jmol/viewer/TransformManager.js
1846 org/jmol/viewer/Viewer.js
1847 org/jmol/viewer/binding/Binding.js
1848 org/jmol/viewer/binding/JmolBinding.js
1849 org/json/CDL.js
1850 org/json/Cookie.js
1851 org/json/CookieList.js
1852 org/json/HTTP.js
1853 org/json/HTTPTokener.js
1854 org/json/JSONArray.js
1855 org/json/JSONException.js
1856 org/json/JSONML.js
1857 org/json/JSONObject.js
1858 org/json/JSONPointer.js
1859 org/json/JSONPointerException.js
1860 org/json/JSONPropertyIgnore.js
1861 org/json/JSONPropertyName.js
1862 org/json/JSONString.js
1863 org/json/JSONStringer.js
1864 org/json/JSONTokener.js
1865 org/json/JSONWriter.js
1866 org/json/Property.js
1867 org/json/XML.js
1868 org/json/XMLTokener.js
1869 org/json/simple/ItemList.js
1870 org/json/simple/JSONArray.js
1871 org/json/simple/JSONAware.js
1872 org/json/simple/JSONObject.js
1873 org/json/simple/JSONStreamAware.js
1874 org/json/simple/JSONValue.js
1875 org/json/simple/parser/ContainerFactory.js
1876 org/json/simple/parser/ContentHandler.js
1877 org/json/simple/parser/JSONParser.js
1878 org/json/simple/parser/ParseException.js
1879 org/json/simple/parser/Yylex.js
1880 org/json/simple/parser/Yytoken.js
1881 org/stackoverflowusers/file/WindowsShortcut.js
1882 org/xml/sax/AttributeList.js
1883 org/xml/sax/Attributes.js
1884 org/xml/sax/ContentHandler.js
1885 org/xml/sax/InputSource.js
1886 org/xml/sax/Parser.js
1887 org/xml/sax/XMLReader.js
1888 org/xml/sax/ext/Attributes2.js
1889 sun/awt/AWTAutoShutdown.js
1890 sun/awt/AppContext.js
1891 sun/awt/CausedFocusEvent.js
1892 sun/awt/ComponentFactory.js
1893 sun/awt/EventQueueItem.js
1894 sun/awt/MostRecentKeyValue.js
1895 sun/awt/MostRecentThreadAppContext.js
1896 sun/awt/PaintEventDispatcher.js
1897 sun/awt/PostEventQueue.js
1898 sun/awt/RequestFocusController.js
1899 sun/awt/SunGraphicsCallback.js
1900 sun/awt/SunToolkit.js
1901 sun/awt/image/DataStealer.js
1902 sun/awt/image/IntegerComponentRaster.js
1903 sun/awt/image/IntegerInterleavedRaster.js
1904 sun/awt/image/SunWritableRaster.js
1905 sun/font/AttributeValues.js
1906 sun/font/EAttribute.js
1907 sun/font/FontDesignMetrics.js
1908 sun/java2d/StateTrackable.js
1909 sun/java2d/StateTrackableDelegate.js
1910 sun/swing/DefaultLookup.js
1911 sun/swing/StringUIClientPropertyKey.js
1912 sun/swing/SwingLazyValue.js
1913 sun/swing/SwingUtilities2.js
1914 sun/swing/UIAction.js
1915 sun/swing/UIClientPropertyKey.js
1916 sun/swing/table/DefaultTableCellHeaderRenderer.js
1917 sun/text/resources/en/FormatData_en_GB.js
1918 sun/util/calendar/AbstractCalendar.js
1919 sun/util/calendar/BaseCalendar.js
1920 sun/util/calendar/CalendarDate.js
1921 sun/util/calendar/CalendarSystem.js
1922 sun/util/calendar/CalendarUtils.js
1923 sun/util/calendar/Gregorian.js
1924 sun/util/calendar/ZoneInfo.js
1925 sun/util/calendar/ZoneInfoFile.js
1926 sun/util/locale/BaseLocale.js
1927 sun/util/locale/LanguageTag.js
1928 sun/util/locale/LocaleUtils.js
1929 sun/util/locale/provider/AvailableLanguageTags.js
1930 sun/util/locale/provider/CalendarDataProviderImpl.js
1931 sun/util/locale/provider/CalendarDataUtility.js
1932 sun/util/locale/provider/CalendarProviderImpl.js
1933 sun/util/locale/provider/DateFormatProviderImpl.js
1934 sun/util/locale/provider/LocaleResources.js
1935 sun/util/locale/provider/LocaleServiceProviderPool.js
1936 sun/util/spi/CalendarProvider.js
1937 swingjs/JSApp.js
1938 swingjs/JSAppletThread.js
1939 swingjs/JSAppletViewer.js
1940 swingjs/JSDummyApplet.js
1941 swingjs/JSFileSystem.js
1942 swingjs/JSFocusPeer.js
1943 swingjs/JSFontMetrics.js
1944 swingjs/JSFrameViewer.js
1945 swingjs/JSGraphics2D.js
1946 swingjs/JSGraphicsConfiguration.js
1947 swingjs/JSGraphicsEnvironment.js
1948 swingjs/JSImage.js
1949 swingjs/JSImagekit.js
1950 swingjs/JSKeyEvent.js
1951 swingjs/JSMenuManager.js
1952 swingjs/JSMouse.js
1953 swingjs/JSScreenDevice.js
1954 swingjs/JSThreadGroup.js
1955 swingjs/JSToolkit.js
1956 swingjs/JSUtil.js
1957 swingjs/api/Interface.js
1958 swingjs/api/JSUtilI.js
1959 swingjs/api/js/DOMNode.js
1960 swingjs/api/js/HTML5Applet.js
1961 swingjs/api/js/HTML5Canvas.js
1962 swingjs/api/js/HTML5CanvasContext2D.js
1963 swingjs/api/js/JSFunction.js
1964 swingjs/api/js/JSInterface.js
1965 swingjs/jquery/JQueryUI.js
1966 swingjs/json/JSON.js
1967 swingjs/jzlib/Adler32.js
1968 swingjs/jzlib/CRC32.js
1969 swingjs/jzlib/Checksum.js
1970 swingjs/jzlib/InfBlocks.js
1971 swingjs/jzlib/InfCodes.js
1972 swingjs/jzlib/InfTree.js
1973 swingjs/jzlib/Inflate.js
1974 swingjs/jzlib/Inflater.js
1975 swingjs/jzlib/InflaterInputStream.js
1976 swingjs/jzlib/ZStream.js
1977 swingjs/plaf/BasicComboBoxEditor.js
1978 swingjs/plaf/BasicComboBoxRenderer.js
1979 swingjs/plaf/BasicHTML.js
1980 swingjs/plaf/ButtonListener.js
1981 swingjs/plaf/CellHolder.js
1982 swingjs/plaf/DefaultMenuLayout.js
1983 swingjs/plaf/HTML5LookAndFeel.js
1984 swingjs/plaf/JSAppletUI.js
1985 swingjs/plaf/JSButtonUI.js
1986 swingjs/plaf/JSCheckBoxMenuItemUI.js
1987 swingjs/plaf/JSCheckBoxUI.js
1988 swingjs/plaf/JSComboBoxUI.js
1989 swingjs/plaf/JSComboPopupList.js
1990 swingjs/plaf/JSComponentUI.js
1991 swingjs/plaf/JSDesktopIconUI.js
1992 swingjs/plaf/JSDesktopPaneUI.js
1993 swingjs/plaf/JSEventHandler.js
1994 swingjs/plaf/JSFrameUI.js
1995 swingjs/plaf/JSGraphicsUtils.js
1996 swingjs/plaf/JSInternalFrameUI.js
1997 swingjs/plaf/JSLabelUI.js
1998 swingjs/plaf/JSLayeredPaneUI.js
1999 swingjs/plaf/JSLightweightUI.js
2000 swingjs/plaf/JSListUI.js
2001 swingjs/plaf/JSMenuBarUI.js
2002 swingjs/plaf/JSMenuItemUI.js
2003 swingjs/plaf/JSMenuUI.js
2004 swingjs/plaf/JSPanelUI.js
2005 swingjs/plaf/JSPopupMenuSeparatorUI.js
2006 swingjs/plaf/JSPopupMenuUI.js
2007 swingjs/plaf/JSPopupUI.js
2008 swingjs/plaf/JSProgressBarUI.js
2009 swingjs/plaf/JSRadioButtonMenuItemUI.js
2010 swingjs/plaf/JSRadioButtonUI.js
2011 swingjs/plaf/JSRootPaneUI.js
2012 swingjs/plaf/JSScrollBarUI.js
2013 swingjs/plaf/JSScrollPaneUI.js
2014 swingjs/plaf/JSSeparatorUI.js
2015 swingjs/plaf/JSSliderUI.js
2016 swingjs/plaf/JSTabbedPaneUI.js
2017 swingjs/plaf/JSTableHeaderUI.js
2018 swingjs/plaf/JSTableUI.js
2019 swingjs/plaf/JSTextAreaUI.js
2020 swingjs/plaf/JSTextFieldUI.js
2021 swingjs/plaf/JSTextUI.js
2022 swingjs/plaf/JSToolTipUI.js
2023 swingjs/plaf/JSViewportUI.js
2024 swingjs/plaf/JSWindowUI.js
2025 swingjs/plaf/LazyActionMap.js
2026 swingjs/plaf/Resizer.js
2027 swingjs/plaf/TextListener.js
2028 swingjs/xml/JSJAXBClass.js
2029 swingjs/xml/JSJAXBContext.js
2030 swingjs/xml/JSJAXBContextFactory.js
2031 swingjs/xml/JSJAXBField.js
2032 swingjs/xml/JSJAXBUnmarshaller.js
2033 swingjs/xml/JSSAXAttributes.js
2034 swingjs/xml/JSSAXParser.js
2035 swingjs/xml/JSXMLGregorianCalendarImpl.js
2036 swingjs/xml/JSXMLInputFactory.js
2037 swingjs/xml/JSXMLStreamReader.js
2038 swingjs/xml/JSXMLStreamReader.jscore/package.js
2039 uk/ac/ebi/picr/model/CrossReference.js
2040 uk/ac/ebi/picr/model/CrossReference_Helper.js
2041 uk/ac/ebi/picr/model/UPEntry.js
2042 uk/ac/ebi/picr/model/UPEntry_Helper.js
2043 uk/ac/ebi/www/Data.js
2044 uk/ac/ebi/www/InputParams.js
2045 uk/ac/ebi/www/WSFile.js
2046 uk/ac/ebi/www/WSWUBlast.js
2047 uk/ac/ebi/www/WSWUBlastService.js
2048 uk/ac/ebi/www/WSWUBlastServiceLocator.js
2049 uk/ac/ebi/www/WSWUBlastSoapBindingStub.js
2050 uk/ac/ebi/www/picr/AccessionMappingService/AccessionMapperBindingStub.js
2051 uk/ac/ebi/www/picr/AccessionMappingService/AccessionMapperInterface.js
2052 uk/ac/ebi/www/picr/AccessionMappingService/AccessionMapperService.js
2053 uk/ac/ebi/www/picr/AccessionMappingService/AccessionMapperServiceLocator.js
2054 vamsas/IMsaWS.js
2055 vamsas/objects/simple/Alignment.js
2056 vamsas/objects/simple/Alignment_Helper.js
2057 vamsas/objects/simple/JpredResult.js
2058 vamsas/objects/simple/JpredResult_Helper.js
2059 vamsas/objects/simple/MsaResult.js
2060 vamsas/objects/simple/MsaResult_Helper.js
2061 vamsas/objects/simple/Msfalignment.js
2062 vamsas/objects/simple/Msfalignment_Helper.js
2063 vamsas/objects/simple/Object.js
2064 vamsas/objects/simple/Object_Helper.js
2065 vamsas/objects/simple/Result.js
2066 vamsas/objects/simple/Result_Helper.js
2067 vamsas/objects/simple/Secstructpred.js
2068 vamsas/objects/simple/Secstructpred_Helper.js
2069 vamsas/objects/simple/SeqSearchResult.js
2070 vamsas/objects/simple/SeqSearchResult_Helper.js
2071 vamsas/objects/simple/Sequence.js
2072 vamsas/objects/simple/SequenceSet.js
2073 vamsas/objects/simple/SequenceSet_Helper.js
2074 vamsas/objects/simple/Sequence_Helper.js
2075 vamsas/objects/simple/WsJobId.js
2076 vamsas/objects/simple/WsJobId_Helper.js