1 #*******************************************************************************
2 # Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
3 # Copyright (C) 2011 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
5 # This file is part of Jalview.
7 # Jalview is free software: you can redistribute it and/or
8 # modify it under the terms of the GNU General Public License
9 # as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
11 # Jalview is distributed in the hope that it will be useful, but
12 # WITHOUT ANY WARRANTY; without even the implied warranty
13 # of MERCHANTABILITY or FITNESS FOR A PARTICULAR
14 # PURPOSE. See the GNU General Public License for more details.
16 # You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
17 #*******************************************************************************
19 # Splits a concatenated set of Stockholm Files into several individual files.
\r
33 if ($_=~/GF\s+AC\s+([0-9.RPF]+)/) {
\r
35 ($fh=new FileHandle)->open(">$ac.stk") or die("Couldn't open file '$ac.stk'");
\r
36 $lns=~/^. STOCKHOLM 1.0/ or $fh->print("# STOCKHOLM 1.0\n");
\r
39 if (defined $lns) {
\r
40 $fh->print($lns); $lns=undef; }
\r