website/version2/examples/examples2.html

   1 <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">\r
   2 <html><!-- InstanceBegin template="/Templates/jtemplate.dwt" codeOutsideHTMLIsLocked="false" -->\r
   3 <head>\r
   4 <!-- InstanceBeginEditable name="doctitle" -->\r
   5 <TITLE>JalView - Java alignment editor</TITLE>\r
   6 <!-- InstanceEndEditable --> \r
   7 <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1">\r
   8 <!-- InstanceBeginEditable name="head" --><!-- InstanceEndEditable --> \r
   9 <style type="text/css">\r
  10 <!--\r
  11 td {\r
  12         font-family: Geneva, Arial, Helvetica, sans-serif;\r
  13         font-size: 12px;\r
  14 }\r
  15 -->\r
  16 </style>\r
  17 </head>\r
  18 \r
  19 <body>\r
  20 <div align="left">\r
  21   <table border="0">\r
  22     <tr> \r
  23       <td width="700" ><center>\r
  24           <table width="550" border="0">\r
  25             <tr>\r
  26               <td width="45%"><div align="center"><a href="http://www.compbio.dundee.ac.uk/~andrew/JalviewWebsite/index.html"><img src="../../snap22med.gif" width="291" height="116" border="0"  align="absmiddle"></a></div></td>\r
  27               <td width="55%"><div align="center"><font size="+6"><strong><font face="Geneva, Arial, Helvetica, sans-serif">Jalview \r
  28                   </font></strong></font> </div>\r
  29                 <div align="center"><font size="3" face="Geneva, Arial, Helvetica, sans-serif">a \r
  30                   multiple alignment editor</font> </div></td>\r
  31             </tr>\r
  32           </table>\r
  33           </center></td>\r
  34     </tr>\r
  35   </table>\r
  36  <br>\r
  37   <table border="0">\r
  38     <tr> \r
  39       <td width="197" valign="top" nowrap> <p><strong>Downloads</strong></p>\r
  40         <ul>\r
  41           <li><a href="../index.html">Jalview</a></li>\r
  42         </ul>\r
  43         <strong>Examples</strong> <ul>\r
  44           <li><a href="applets.html">Applet</a></li>\r
  45           <li><a href="examples.html">Application</a></li>\r
  46         </ul>\r
  47         <strong>Reference</strong> <ul>\r
  48           <li> <a href="../../jalview.pdf" target="_blank">&quot;The Jalview Java<br>\r
  49             Alignment Editor,&quot;<br>\r
  50             </a></li>\r
  51           <a href="../../jalview.pdf"><em>Bioinformatics</em>, 12, 426-7</a> \r
  52         </ul>\r
  53         <strong>Source Code</strong> <ul>\r
  54           <li>Jalview 2</li>\r
  55         </ul>\r
  56         <p><strong>Feedback</strong></p>\r
  57         <p>&nbsp;&nbsp;&nbsp;<img src="../../help.gif" width="151" height="43"> </p>\r
  58         <p><br>\r
  59           <a href="http://www.bbsrc.ac.uk/"> <img border="0"src="../../bbsrc.jpg"></a> \r
  60         </p></td>\r
  61       <td width="499" valign="top"><!-- InstanceBeginEditable name="Contents" -->\r
  62         <p>Several of the most popular sequence alignment algorithms and / or \r
  63           programs have been implemented as web services which Jalview has access \r
  64           to.</p>\r
  65         <p>The figure below shows the web service status window indicating that \r
  66           a Muscle Alignment job as run to completion. The window shows important \r
  67           feedback regarding the alignement. </p>\r
  68         <p><img src="muscle.jpg" width="518" height="377"> </p>\r
  69         <p align="center">&nbsp;</p>\r
  70         <p align="center"><strong><font size="3"><a href="examples.html">&lt; \r
  71           Back</a>&nbsp;&nbsp;&nbsp;&nbsp;<a href="examples3.html">Next &gt;</a></font></strong></p>\r
  72         <!-- InstanceEndEditable --> \r
  73       </td>\r
  74     </tr>\r
  75   </table>\r
  76 </div>\r
  77 </body>\r
  78 <!-- InstanceEnd --></html>\r