website/version2/examples/examples5.html

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   5 <TITLE>JalView - Java alignment editor</TITLE>\r
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  26               <td width="45%"><div align="center"><a href="http://www.compbio.dundee.ac.uk/~andrew/JalviewWebsite/index.html"><img src="../../snap22med.gif" width="291" height="116" border="0"  align="absmiddle"></a></div></td>\r
  27               <td width="55%"><div align="center"><font size="+6"><strong><font face="Geneva, Arial, Helvetica, sans-serif">Jalview \r
  28                   </font></strong></font> </div>\r
  29                 <div align="center"><font size="3" face="Geneva, Arial, Helvetica, sans-serif">a \r
  30                   multiple alignment editor</font> </div></td>\r
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  39       <td width="197" valign="top" nowrap> <p><strong>Downloads</strong></p>\r
  40         <ul>\r
  41           <li><a href="../index.html">Jalview</a></li>\r
  42         </ul>\r
  43         <strong>Examples</strong> <ul>\r
  44           <li><a href="applets.html">Applet</a></li>\r
  45           <li><a href="examples.html">Application</a></li>\r
  46         </ul>\r
  47         <strong>Reference</strong> <ul>\r
  48           <li> <a href="../../jalview.pdf" target="_blank">&quot;The Jalview Java<br>\r
  49             Alignment Editor,&quot;<br>\r
  50             </a></li>\r
  51           <a href="../../jalview.pdf"><em>Bioinformatics</em>, 12, 426-7</a> \r
  52         </ul>\r
  53         <strong>Source Code</strong> <ul>\r
  54           <li>Jalview 2</li>\r
  55         </ul>\r
  56         <p><strong>Feedback</strong></p>\r
  57         <p>&nbsp;&nbsp;&nbsp;<img src="../../help.gif" width="151" height="43"> </p>\r
  58         <p><br>\r
  59           <a href="http://www.bbsrc.ac.uk/"> <img border="0"src="../../bbsrc.jpg"></a> \r
  60         </p></td>\r
  61       <td width="499" valign="top"><!-- InstanceBeginEditable name="Contents" --> \r
  62         <p align="center">Jalview maintains the ability to perform Principal Component \r
  63           Analysis on an alignment. The method is used to cluster similar sequences, \r
  64           the user may then select sequences from this 3D visual display.</p>\r
  65         <p align="center"><img src="pca.gif" width="394" height="396"></p>\r
  66         <p align="center"><br>\r
  67           PDB structures may be displayed if Jalview can find a match of the input \r
  68           sequence and Uniprot. </p>\r
  69         <p align="center"><img src="pdb.gif" width="395" height="397"></p>\r
  70         <p align="center"><strong><a href="examples4.html"><font size="3">&lt; \r
  71           Back</font></a></strong></p>\r
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