1 = Archaeopteryx Documentation =
2 <wiki:toc max_depth="3" />
8 Documentation, tutorial, and examples for visualization, analysis, and editing of phylogenetic trees with [http://www.phylosoft.org/archaeopteryx/ Archaeopteryx].
10 Author: [http://www.cmzmasek.net/ Christian M Zmasek], Sanford-Burnham Medical Research Institute
13 Copyright (C) 2012 Christian M Zmasek. All rights reserved.
17 = Frequently Asked Questions =
19 == How to read and display vector or expression data ==
21 Aptx can be used to display vector or expression data associated with tree nodes:
23 1 Ensure the configuration file contains this line: "show_vector_data: display yes"
25 2 Start Aptx and read in a tree ([http://forester.googlecode.com/files/apaf.xml example tree])
27 3 Open "Tools" menu and select "read Vector/Expression Values"