wiki/genetreepreprocessing.wiki

   1 = Gene tree Preprocessing =
   2
   3 == Usage ==
   4 `java -Xmx1024m -cp
   5 path/to/forester.jar org.forester.application.gene_tree_preprocess <input tree in NH, NHX, Nexus, or phyloXML>`
   6
   7
   8
   9 == Details ==
  10
  11 Output is two files:
  12   * <input>_preprocessed_gene_tree.phylo.xml
  13   * <input>_removed_nodes.txt