git://source.jalview.org
/
jalview.git
/ blob
commit
grep
author
committer
pickaxe
?
search:
re
d2d951c4b92f1daf54e855b63563c27b73db2394
[jalview.git]
/
wiki
/
genetreepreprocessing.wiki
1
= Gene tree Preprocessing =
2
3
== Usage ==
4
{{{java -Xmx1024m -cp
5
path/to/forester.jar org.forester.application.gene_tree_preprocess <input tree in NH, NHX, Nexus, or phyloXML>}}}
6
7
8
9
== Details ==
10
11
Output is two files:
12
* input-name_preprocessed_gene_tree.phylo.xml
13
* input-name_removed_nodes.txt