import java.awt.event.ComponentListener;
import java.awt.image.BufferedImage;
import java.util.ArrayList;
+import java.util.HashMap;
import java.util.Hashtable;
import java.util.List;
+import java.util.Map;
import java.util.Set;
import javax.swing.JPanel;
private Phylogeny _cut_or_copied_tree;
private Set<Integer> _copied_and_pasted_nodes;
private Hashtable<String, BufferedImage> _image_map;
+ private static Map<String, String> _lineage_to_rank_map;
MainPanel() {
}
- MainPanel( final Configuration configuration, final MainFrame parent ) {
+ public MainPanel( final Configuration configuration, final MainFrame parent ) {
if ( configuration == null ) {
throw new IllegalArgumentException( "configuration is null" );
}
getControlPanel().showWhole();
}
- void addPhylogenyInNewTab( final Phylogeny phy,
- final Configuration config,
- final String default_name,
- final String full_path ) {
+ public void addPhylogenyInNewTab( final Phylogeny phy,
+ final Configuration config,
+ final String default_name,
+ final String full_path ) {
final TreePanel treepanel = new TreePanel( phy, config, this );
getControlPanel().phylogenyAdded( config );
treepanel.setControlPanel( getControlPanel() );
return _configuration;
}
- ControlPanel getControlPanel() {
+ public ControlPanel getControlPanel() {
return _control_panel;
}
}
}
- TreePanel getCurrentTreePanel() {
+ public TreePanel getCurrentTreePanel() {
final int selected = getTabbedPane().getSelectedIndex();
if ( selected >= 0 ) {
return _treepanels.get( selected );
return getCurrentScrollPane().getViewport().getExtentSize();
}
- JTabbedPane getTabbedPane() {
+ public JTabbedPane getTabbedPane() {
return _tabbed_pane;
}
synchronized Hashtable<String, BufferedImage> getImageMap() {
return _image_map;
}
+
+ public synchronized static Map<String, String> getLineageToRankMap() {
+ if ( _lineage_to_rank_map == null ) {
+ _lineage_to_rank_map = new HashMap<String, String>();
+ }
+ return _lineage_to_rank_map;
+ }
}