+/* vim: set ts=2: */
+/**
+ * Copyright (c) 2006 The Regents of the University of California.
+ * All rights reserved.
+ *
+ * Redistribution and use in source and binary forms, with or without
+ * modification, are permitted provided that the following conditions
+ * are met:
+ * 1. Redistributions of source code must retain the above copyright
+ * notice, this list of conditions, and the following disclaimer.
+ * 2. Redistributions in binary form must reproduce the above
+ * copyright notice, this list of conditions, and the following
+ * disclaimer in the documentation and/or other materials provided
+ * with the distribution.
+ * 3. Redistributions must acknowledge that this software was
+ * originally developed by the UCSF Computer Graphics Laboratory
+ * under support by the NIH National Center for Research Resources,
+ * grant P41-RR01081.
+ *
+ * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDER "AS IS" AND ANY
+ * EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+ * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
+ * PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE REGENTS BE LIABLE
+ * FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
+ * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT
+ * OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR
+ * BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
+ * WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE
+ * OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE,
+ * EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+ *
+ */
package ext.edu.ucsf.rbvi.strucviz2;
/**
- * This object maintains the relationship between Chimera objects and Cytoscape objects.
+ * This object maintains the relationship between Chimera objects and Cytoscape
+ * objects.
*/
-public class StructureSettings {
+public class StructureSettings
+{
-// @Tunable(description = "Path to UCSF Chimera application", gravity = 4.0)
- public String chimeraPath = null;
+ // @Tunable(description = "Path to UCSF Chimera application", gravity = 4.0)
+ public String chimeraPath = null;
- public StructureSettings(StructureManager manager) {
-
- chimeraPath = manager.getCurrentChimeraPath(null);
+ public StructureSettings(StructureManager manager)
+ {
- // This seems a little strange, but it has to do with the order of tunable interceptor
- // handling. We need to set these selectors in our structure manager and dynamically
- // pull the data out as needed....
- manager.setStructureSettings( this);
- }
+ chimeraPath = manager.getCurrentChimeraPath(null);
+ // This seems a little strange, but it has to do with the order of tunable
+ // interceptor
+ // handling. We need to set these selectors in our structure manager and
+ // dynamically
+ // pull the data out as needed....
+ manager.setStructureSettings(this);
+ }
- public String getChimeraPath() {
- return chimeraPath;
- }
+ public String getChimeraPath()
+ {
+ return chimeraPath;
+ }
}