* position is not a gap
*/
Set<String> types = new HashSet<>();
- List<SequenceFeature> sfs = fr.findFeaturesAtResidue(
- seq.getRefSeq(), spos);
+ List<SequenceFeature> sfs = fr
+ .findFeaturesAtResidue(seq.getRefSeq(), spos, spos);
for (SequenceFeature sf : sfs)
{
types.add(sf.getType());