*
* @param updateOverview
* - if true, the overview panel will also be updated and repainted
+ * @param updateStructures
+ * - if true then any linked structure views will also be updated
*/
-
- void paintAlignment(boolean updateOverview);
+ void paintAlignment(boolean updateOverview, boolean updateStructures);
/**
* automatically adjust annotation panel height for new annotation whilst
* @return displayed name for the view
*/
String getViewName();
+
+ /**
+ * Answers the title of the panel
+ *
+ * @return
+ */
+ String getTitle();
+
+ /**
+ * Make/Unmake this alignment panel the current input focus
+ *
+ * @param b
+ */
+ void setSelected(boolean b);
}