import jalview.ext.jmol.JalviewJmolBinding;
import jalview.io.DataSourceType;
import jalview.structure.StructureSelectionManager;
+import jalview.util.Platform;
import java.awt.Container;
+import java.io.File;
+import java.util.List;
import java.util.Map;
import org.jmol.api.JmolAppConsoleInterface;
+
import javajs.util.BS;
-import org.openscience.jmol.app.jmolpanel.console.AppConsole;
public class AppJmolBinding extends JalviewJmolBinding
{
- private AppJmol appJmolWindow;
+ protected AppJmol appJmolWindow;
public AppJmolBinding(AppJmol appJmol, StructureSelectionManager sSm,
PDBEntry[] pdbentry, SequenceI[][] sequenceIs,
return null;
}
+
+ @SuppressWarnings("unused")
+ public void cacheFiles(List<File> files)
+ {
+ if (files == null)
+ {
+ return;
+ }
+ for (File f : files)
+ {
+ String path = f.getAbsolutePath();
+ byte[] data = Platform.getFileBytes(f);
+ if (data != null)
+ {
+ Platform.cacheFileData(path, data);
+ }
+ }
+ }
}