/*\r
* Jalview - A Sequence Alignment Editor and Viewer\r
- * Copyright (C) 2006 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
+ * Copyright (C) 2007 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
*\r
* This program is free software; you can redistribute it and/or\r
* modify it under the terms of the GNU General Public License\r
\r
public interface ColourSchemeI\r
{\r
- public Color findColour(String aa);\r
+ public Color findColour(char c);\r
\r
- public Color findColour(String s, int j);\r
+ public Color findColour(char c, int j);\r
\r
- public void setConsensus(java.util.Vector v);\r
+ public void setConsensus(java.util.Hashtable[] h);\r
\r
public void setConservation(jalview.analysis.Conservation c);\r
\r
\r
public void setThreshold(int ct, boolean ignoreGaps);\r
\r
-\r
}\r