/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2b1)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
*
* This file is part of Jalview.
*
*/
package jalview.ws.dbsources;
-import com.stevesoft.pat.Regex;
-
+import jalview.datamodel.DBRefSource;
import jalview.ws.seqfetcher.DbSourceProxy;
+import com.stevesoft.pat.Regex;
+
/**
* Contains methods for fetching sequences from Rfam database
*
{
super();
// all extensions of this RFAM source base class are DOMAINDB sources
- addDbSourceProperty(jalview.datamodel.DBRefSource.DOMAINDB);
- addDbSourceProperty(jalview.datamodel.DBRefSource.ALIGNMENTDB);
+ addDbSourceProperty(DBRefSource.DOMAINDB);
+ addDbSourceProperty(DBRefSource.ALIGNMENTDB);
}
/*
* this doesn't work - DbSource is key for the hash of DbSourceProxy instances
* - 1:many mapping for DbSource to proxy will be lost. * suggest : RFAM is an
* 'alignment' source - means proxy is higher level than a sequence source.
- * return jalview.datamodel.DBRefSource.RFAM; }
+ * return DBRefSource.RFAM; }
*/
/*
*/
public String getXfamSource()
{
- return jalview.datamodel.DBRefSource.RFAM;
+ return DBRefSource.RFAM;
}
}