-##################
-
-To run application...
-[ NOTE: when using the -classpath option with the '*' wildcard, the argument must be quoted to avoid shell expansion of the wildcard,
- ALSO, the wildcard MUST be as DIR/* and not DIR/*.jar etc or it will not be interpreted correctly ]
-
-on Windows use:
- java -classpath "JALVIEW_HOME/lib/*;JALVIEW_HOME/jalview.jar" jalview.bin.Jalview
-and on MacOS or Linux:
- java -classpath "JALVIEW_HOME/lib/*:JALVIEW_HOME/jalview.jar" jalview.bin.Jalview
-
-Replace JALVIEW_HOME with the full path to Jalview Installation Directory. If building from source:
-
- java -classpath "JALVIEW_BUILD/dist/*" jalview.bin.Jalview
-
-
-##################
-
-
-If you use a proxy server add
-
--Dhttp.proxyServer=YOUR.SERVER -Dhttp.proxyPort=YOURPORT
-
-If the proxy server requires authentication, add
-
--Dhttp.proxyUser=USERNAME -Dhttp.proxyPassword=PASSWORD
+If you want to build JalviewJS then you will also need to download
+Eclipse for your platform, since transpilation requires an Eclipse
+plugin.