- include (eclipse_extra_jdt_prefs_file)
- include ("$schemaDir/**/*")
- include ("$utilsDir/**/*")
- include ("$docDir/**/*")
- include ("$examplesDir/**/*")
- include ("getdown/**/*")
-
- include ("$sourceDir/**/*.cdr")
- include ("$j8libDir/**/*.jar")
- include ("$j11libDir/**/*.jar")
- include ("$resourceDir/**/*")
-
- //include ("jalview-jalopy.xml")
- //include ("JalviewApplet.jpx")
- //include ("JalviewX.jpx")
- //include ("nbbuild.xml")
- //include ("nbproject/genfiles.properties")
- //include ("nbproject/project.properties")
- //include ("nbproject/project.xml")
-
- include ("$helpDir/**/*")
- exclude ("$helpDir/**/*.html")
-