+ <target name="pubapplet" description="installs the jalviewLite applet and dependent jars into an applet examples directory built under ${outputDir}" depends="makeApplet">
+ <copy todir="${packageDir}/examples">
+ <fileset dir="examples">
+ <include name="**/*"/>
+ <include name="javascript/*"/>
+ <include name="jmol/*"/>
+ </fileset>
+ <fileset dir=".">
+ <include name="${jalviewLiteJar}"/>
+ </fileset>
+ <fileset dir="appletlib">
+ <include name="**/*"/>
+ </fileset>
+ </copy>
+ <presetdef name="applet.jar">
+ <jar update="true" index="true">
+ <manifest>
+ <attribute name="Application-Name" value="JalviewLite"/>
+ <attribute name="Permissions" value="all-permissions"/>
+ <attribute name="Codebase" value="${applet.codebase}"/>
+ <attribute name="Caller-Allowable-Codebase" value="${applet.caller-codebase}"/>
+ <attribute name="Application-Library-Allowable-Codebase" value="${applet.codebase}"/>
+ <!--
+ <attribute name="Application-Library-Allowable-Codebase" value="${applet.codebase}"/>
+ -->
+<!-- <attribute name="Trusted-Only" value="true"/>
+-->
+<!-- <attribute name="Trusted-Library" value="true"/>
+-->
+ </manifest>
+ </jar>
+ </presetdef>
+ <presetdef name="applet_tl.jar">
+ <jar update="true" index="true" jarfile="@{jarfile}">
+ <manifest>
+ <attribute name="Application-Name" value="JalviewLite"/>
+ <attribute name="Permissions" value="all-permissions" />
+ <attribute name="Codebase" value="${applet.codebase}"/>
+ <attribute name="Trusted-Only" value="true"/>
+ <attribute name="Trusted-Library" value="true"/>
+ </manifest>
+ </jar>
+
+ </presetdef>
+ <copy file="${packageDir}/examples/${jalviewLiteJar}" tofile="${packageDir}/examples/tl_${jalviewLiteJar}"/>
+ <copy file="${packageDir}/examples/${jmolJar}" tofile="${packageDir}/examples/tl_${jmolJar}"/>
+ <applet.jar jarfile="${packageDir}/examples/${jalviewLiteJar}"/>
+ <applet_tl.jar jarfile="${packageDir}/examples/tl_${jalviewLiteJar}"/>
+ <applet.jar jarfile="${packageDir}/examples/${jmolJar}"/>
+ <applet_tl.jar jarfile="${packageDir}/examples/tl_${jmolJar}"/>
+ <signjar storepass="${jalview.keystore.pass}" keypass="${jalview.key.pass}" keystore="${jalview.keystore}" alias="${jalview.key}" lazy="false" verbose="false">
+
+ <fileset dir="${packageDir}/examples">
+ <include name="*.jar" />
+ </fileset>
+ </signjar>
+ </target>
+ <target name="sourcedoc" description="Create jalview source documentation pages" depends="init">
+ <javadoc destdir="${javadocDir}">
+ <packageset dir="${sourceDir}" includes="jalview/*,MCView/*">
+ </packageset>
+ </javadoc>
+ </target>
+