System.out.println( " Options: -knn to keep listed nodes" );
System.out.println( " -rnn to remove listed nodes" );
System.out.println( " -knnp to keep nodes found in [ref-tree]" );
System.out.println( " Options: -knn to keep listed nodes" );
System.out.println( " -rnn to remove listed nodes" );
System.out.println( " -knnp to keep nodes found in [ref-tree]" );