- SurfacingUtil.writeMatrixToFile( new File( matrix_output_file
- + surfacing_hmmpfam.MATRIX_MEAN_SCORE_BASED_GENOME_DISTANCE_SUFFIX ), pwgc
- .getDomainDistanceScoresMeans() );
- SurfacingUtil.writeMatrixToFile( new File( matrix_output_file
- + surfacing_hmmpfam.MATRIX_SHARED_BIN_COMBINATIONS_BASED_GENOME_DISTANCE_SUFFIX ), pwgc
- .getSharedBinaryCombinationsBasedDistances() );
- SurfacingUtil.writeMatrixToFile( new File( matrix_output_file
- + surfacing_hmmpfam.MATRIX_SHARED_DOMAINS_BASED_GENOME_DISTANCE_SUFFIX ), pwgc
- .getSharedDomainsBasedDistances() );
+ SurfacingUtil
+ .writeMatrixToFile( new File( matrix_output_file
+ + surfacing_hmmpfam.MATRIX_MEAN_SCORE_BASED_GENOME_DISTANCE_SUFFIX ),
+ pwgc.getDomainDistanceScoresMeans() );
+ SurfacingUtil
+ .writeMatrixToFile( new File( matrix_output_file
+ + surfacing_hmmpfam.MATRIX_SHARED_BIN_COMBINATIONS_BASED_GENOME_DISTANCE_SUFFIX ),
+ pwgc.getSharedBinaryCombinationsBasedDistances() );
+ SurfacingUtil
+ .writeMatrixToFile( new File( matrix_output_file
+ + surfacing_hmmpfam.MATRIX_SHARED_DOMAINS_BASED_GENOME_DISTANCE_SUFFIX ),
+ pwgc.getSharedDomainsBasedDistances() );