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[jalview.git]
/
forester
/
java
/
src
/
org
/
forester
/
archaeopteryx
/
Configuration.java
diff --git
a/forester/java/src/org/forester/archaeopteryx/Configuration.java
b/forester/java/src/org/forester/archaeopteryx/Configuration.java
index
aa3da2c
..
1914d76
100644
(file)
--- a/
forester/java/src/org/forester/archaeopteryx/Configuration.java
+++ b/
forester/java/src/org/forester/archaeopteryx/Configuration.java
@@
-400,6
+400,10
@@
public final class Configuration {
getDisplayColors().put( key, color );
}
getDisplayColors().put( key, color );
}
+ public void setAddTaxonomyImagesCB( final boolean b ) {
+ display_options[ show_taxonomy_images ][ 1 ] = b ? "yes" : "no";
+ }
+
public void setAbbreviateScientificTaxonNames( final boolean abbreviate_scientific_names ) {
_abbreviate_scientific_names = abbreviate_scientific_names;
}
public void setAbbreviateScientificTaxonNames( final boolean abbreviate_scientific_names ) {
_abbreviate_scientific_names = abbreviate_scientific_names;
}
@@
-440,6
+444,10
@@
public final class Configuration {
display_options[ display_as_phylogram ][ 2 ] = b ? "yes" : "no";
}
display_options[ display_as_phylogram ][ 2 ] = b ? "yes" : "no";
}
+ public void setUseStyle( final boolean b ) {
+ display_options[ use_style ][ 2 ] = b ? "yes" : "no";
+ }
+
public void setDisplayColors( final SortedMap<String, Color> display_colors ) {
_display_colors = display_colors;
}
public void setDisplayColors( final SortedMap<String, Color> display_colors ) {
_display_colors = display_colors;
}
@@
-464,6
+472,10
@@
public final class Configuration {
display_options[ show_seq_names ][ 2 ] = b ? "yes" : "no";
}
display_options[ show_seq_names ][ 2 ] = b ? "yes" : "no";
}
+ public void setDisplayGeneNames( final boolean b ) {
+ display_options[ show_gene_names ][ 2 ] = b ? "yes" : "no";
+ }
+
public void setDisplaySequenceRelations( final boolean display_sequence_relations ) {
_display_sequence_relations = display_sequence_relations;
}
public void setDisplaySequenceRelations( final boolean display_sequence_relations ) {
_display_sequence_relations = display_sequence_relations;
}