git://source.jalview.org
/
jalview.git
/ blobdiff
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
raw
|
inline
| side by side
getting of external node data
[jalview.git]
/
forester
/
java
/
src
/
org
/
forester
/
archaeopteryx
/
MainFrame.java
diff --git
a/forester/java/src/org/forester/archaeopteryx/MainFrame.java
b/forester/java/src/org/forester/archaeopteryx/MainFrame.java
index
26600d9
..
ac08d25
100644
(file)
--- a/
forester/java/src/org/forester/archaeopteryx/MainFrame.java
+++ b/
forester/java/src/org/forester/archaeopteryx/MainFrame.java
@@
-48,6
+48,7
@@
import javax.swing.SwingUtilities;
import org.forester.archaeopteryx.Options.CLADOGRAM_TYPE;
import org.forester.archaeopteryx.Options.NODE_LABEL_DIRECTION;
import org.forester.archaeopteryx.Options.PHYLOGENY_GRAPHICS_TYPE;
import org.forester.archaeopteryx.Options.CLADOGRAM_TYPE;
import org.forester.archaeopteryx.Options.NODE_LABEL_DIRECTION;
import org.forester.archaeopteryx.Options.PHYLOGENY_GRAPHICS_TYPE;
+import org.forester.archaeopteryx.tools.InferenceManager;
import org.forester.archaeopteryx.tools.ProcessPool;
import org.forester.archaeopteryx.tools.ProcessRunning;
import org.forester.phylogeny.Phylogeny;
import org.forester.archaeopteryx.tools.ProcessPool;
import org.forester.archaeopteryx.tools.ProcessRunning;
import org.forester.phylogeny.Phylogeny;
@@
-215,6
+216,7
@@
public abstract class MainFrame extends JFrame implements ActionListener {
Configuration _configuration;
JMenuItem _remove_branch_color_item;
Options _options;
Configuration _configuration;
JMenuItem _remove_branch_color_item;
Options _options;
+ InferenceManager _inference_manager;
final ProcessPool _process_pool;
MainFrame() {
final ProcessPool _process_pool;
MainFrame() {
@@
-901,6
+903,14
@@
public abstract class MainFrame extends JFrame implements ActionListener {
_options = options;
}
_options = options;
}
+ void setInferenceManager( final InferenceManager i ) {
+ _inference_manager = i;
+ }
+
+ public InferenceManager getInferenceManager() {
+ return _inference_manager;
+ }
+
void setSelectedTypeInTypeMenu( final PHYLOGENY_GRAPHICS_TYPE type ) {
setTypeMenuToAllUnselected();
switch ( type ) {
void setSelectedTypeInTypeMenu( final PHYLOGENY_GRAPHICS_TYPE type ) {
setTypeMenuToAllUnselected();
switch ( type ) {