- public static final String PFAM_INST = "pfam";
- public static final String PFAM_NAME = "Pfam";
- public static final String PFAM_SERVER = "http://pfam.janelia.org";
- public static final String TOL_NAME = "Tree of Life";
- public static final String TOL_WEBSERVER = "http://tolweb.org/onlinecontributors/app?service=external&page=xml/TreeStructureService&node_id="
- + PhylogeniesWebserviceClient.QUERY_PLACEHOLDER;
- public static final String TREE_BASE_DESC = "This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment.";
- public static final String TREE_BASE_INST = "treebase";
- public static final String TREE_BASE_NAME = "TreeBASE";
- public static final String TREE_FAM_INST = "tree_fam";
- public static final String TREE_FAM_NAME = "TreeFam";
-
+ public static final String PFAM_INST = "pfam";
+ public static final String PFAM_NAME = "Pfam";
+ public static final String PFAM_SERVER = "http://pfam.xfam.org";
+ public static final String TOL_NAME = "Tree of Life (ToL)";
+ public static final String TOL_URL_BASE = "http://tolweb.org/onlinecontributors/app?service=external&page=xml/TreeStructureService&node_id=";
+ public static final String TOL_WEBSERVER = TOL_URL_BASE
+ + PhylogeniesWebserviceClient.QUERY_PLACEHOLDER;
+ public static final String TREE_BASE_DESC = "This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment.";
+ public static final String TREE_BASE_INST = "treebase";
+ public static final String TREE_BASE_NAME = "TreeBASE";
+ public static final String TREE_FAM_INST = "tree_fam";
+ public static final String TREE_FAM_NAME = "TreeFam";
+ public static final String TREE_FAM_URL_BASE = "http://www.treefam.org/family/TF";
+ public static final String TREEBASE_PHYLOWS_STUDY_URL_BASE = "https://treebase.org/treebase-web/phylows/study/TB2:S";
+ public static final String TREEBASE_PHYLOWS_TREE_URL_BASE = "https://treebase.org/treebase-web/phylows/tree/TB2:Tr";
+
+
+