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added -rs option
[jalview.git]
/
forester
/
java
/
src
/
org
/
forester
/
clade_analysis
/
Prefix.java
diff --git
a/forester/java/src/org/forester/clade_analysis/Prefix.java
b/forester/java/src/org/forester/clade_analysis/Prefix.java
index
009c63f
..
5bb251b
100644
(file)
--- a/
forester/java/src/org/forester/clade_analysis/Prefix.java
+++ b/
forester/java/src/org/forester/clade_analysis/Prefix.java
@@
-3,6
+3,7
@@
package org.forester.clade_analysis;
import java.math.BigDecimal;
import java.text.DecimalFormat;
import java.math.BigDecimal;
import java.text.DecimalFormat;
+import java.util.regex.Pattern;
public final class Prefix {
public final class Prefix {
@@
-39,6
+40,10
@@
public final class Prefix {
public String getPrefix() {
return _prefix;
}
public String getPrefix() {
return _prefix;
}
+
+ public String getPrefixRemovSeparator() {
+ return _prefix.replaceAll( Pattern.quote( _separator ), "" );
+ }
public String getPrefixFirstElement() {
return _first;
public String getPrefixFirstElement() {
return _first;
@@
-52,4
+57,8
@@
public final class Prefix {
public String toString() {
return getPrefix() + ": " + df.format( getConfidence() );
}
public String toString() {
return getPrefix() + ": " + df.format( getConfidence() );
}
+
+ public String toStringRemovSeparator() {
+ return getPrefixRemovSeparator() + ": " + df.format( getConfidence() );
+ }
}
}