final private void mafft() throws IOException, InterruptedException {
final MsaInferrer mafft = Mafft.createInstance( "/home/czmasek/bin/mafft" );
final List<String> opts = new ArrayList<String>();
final private void mafft() throws IOException, InterruptedException {
final MsaInferrer mafft = Mafft.createInstance( "/home/czmasek/bin/mafft" );
final List<String> opts = new ArrayList<String>();